CB611136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.747e-37 Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRRRQ 307 Y+GH LRTLIRC+ SP YSTGQKYIYTGS D CVY+YDLV+G QVA L +H PVRDCSWHP PMLVSSSWDG + RWEFPG+ + P L + R RR++ Sbjct: 373 YRGHGVLRTLIRCYLSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGD-DQVPTLERPRARRKE 472
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-36 Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNGEAAPPLNKKRIRR 301 YKGH L TLIRC+FSP YSTGQKYIYTGSHD+ VY+YDLV+G+QV+ L+YH + VRDCSWHP+ PMLVSSS+DG++V+WE+ GN EA N +R++R Sbjct: 375 YKGHSVLCTLIRCYFSPDYSTGQKYIYTGSHDANVYIYDLVTGDQVSTLQYHKATVRDCSWHPNYPMLVSSSFDGEIVKWEYRGNDEAPVQGNNQRLQR 473
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_PONAB (DDB1- and CUL4-associated factor 11 OS=Pongo abelii GN=DCAF11 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 250 Y+GH L TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 431 YRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_HUMAN (DDB1- and CUL4-associated factor 11 OS=Homo sapiens GN=DCAF11 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 250 Y+GH L TLIRC FSP++STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 431 YRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_BOVIN (DDB1- and CUL4-associated factor 11 OS=Bos taurus GN=DCAF11 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.865e-20 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 250 Y+GH L TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 431 YRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_MOUSE (DDB1- and CUL4-associated factor 11 OS=Mus musculus GN=Dcaf11 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.742e-20 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 250 Y+GH L TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG++ W++ Sbjct: 431 YRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQY 512
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_RAT (DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus GN=Dcaf11 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.888e-20 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 YKGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEF 250 Y+GH L TLIRC FSP +STGQ++IY+G V VYDL+SG V L H + VRD SWHP + +VSSSWDG + W++ Sbjct: 431 YRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQY 512
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_CAEEL (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis elegans GN=wdr-23 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 8 KGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 274 +GH L TL+R +FSP STG++YIYTG V VYD++SG LK HT+ VR+C WHP++ +VSS+WDG V W+ G AP Sbjct: 434 RGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTVSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAP 523
BLAST of CB611136 vs. ExPASy Swiss-Prot
Match: DCA11_CAEBR (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis briggsae GN=wdr-23 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 8 KGHPFLRTLIRCHFSPVYSTGQKYIYTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDG--DVVRWEFPGNGEAAP 274 +GH L TL+R FSP +TG+++IYTG + VYD+V+G LK H + VR+C WHP + +VS+SWDG V W+ G AP Sbjct: 413 RGHSVLHTLVRAKFSPE-NTGRRFIYTGCARGEIVVYDIVTGTVSRRLKGHQAVVRECDWHPQENEIVSTSWDGVTTVWTWDERAEGVIAP 502 The following BLAST results are available for this feature:
BLAST of CB611136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611136 ID=CB611136; Name=CB611136; organism=Citrus sinensis; type=EST; length=560bpback to top |