CB611164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C3_ARATH (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana GN=At5g61310 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.938e-17 Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVV 262 MAGHKIAHATLKGPSVVKE+ WKM+ WN QRK+RVFYDLLE+GEI VVV Sbjct: 1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVV 61
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: COX5C_ORYSJ (Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica GN=COX5C PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVVKK 268 MAG +IAHATLKGPSVVKEIC WKM+ WN QRK+R FYD+LEKG+I+VVV++ Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVVVEE 63
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C2_ARATH (Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana GN=At3g62400 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.873e-16 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVVKK 268 MAGHK+AHATLKGPSVVKE+ WKM+ WN QRK+R FYDLLE+GEI VV + Sbjct: 1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEIGVVASE 63
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C1_ARATH (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana GN=At2g47380 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.671e-16 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVV 259 MAGHK+AHATLKGPSVVKE+ WKM+ WN QRK+R FYDLLE+GEI+VV Sbjct: 1 MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: COX5C_HORVU (Cytochrome c oxidase subunit 5C OS=Hordeum vulgare GN=COX5C PE=3 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.481e-15 Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVVKK 268 MAG ++AHATLKGPSVVKEI WKM+ WN QRK+R FYD+LEKG+I+VVV++ Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVVVEE 63
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C2_HELAN (Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus GN=COX5C2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.225e-13 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVV 262 M G ++AH LKGPSVVKE+ WKM+ WN QRK+R FYDLLEKGEI+VVV Sbjct: 1 MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVVV 61
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C1_HELAN (Cytochrome c oxidase subunit 5C-1 OS=Helianthus annuus GN=COX5C1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.563e-13 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVVKK 268 M G ++AH LKGPS VKE+ WKM+ WN QRK+R FYDLLEKGEI+VVV++ Sbjct: 1 MVGGRVAHPVLKGPSEVKELIIGSVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVVVQE 63
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: CX5C4_ARATH (Putative cytochrome c oxidase subunit 5C-4 OS=Arabidopsis thaliana GN=At5g40382 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.146e-11 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 2 Query: 92 KIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVVVK 265 KI A KGPSVVKEI WKM+ WNNQR+++ FYDLLEKGEI+VVV+ Sbjct: 6 KIGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVE 63
BLAST of CB611164 vs. ExPASy Swiss-Prot
Match: COX5C_IPOBA (Cytochrome c oxidase subunit 5C OS=Ipomoea batatas GN=COX5C PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 2 Query: 80 MAGHKIAHATLKGPSVVKEICXXXXXXXXXXXXWKMNQWNNQRKSRVFYDLLEKGEINVV 259 MAG +AH KGPSVVKE+ WKM+ WN+QR+++ FYD+LEKG+I+VV Sbjct: 1 MAGGHVAHLVYKGPSVVKELVIGFSLGLVAGGFWKMHHWNSQRRTKEFYDMLEKGQISVV 60 The following BLAST results are available for this feature:
BLAST of CB611164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611164 ID=CB611164; Name=CB611164; organism=Citrus sinensis; type=EST; length=282bpback to top |