CB611166

Overview
NameCB611166
Unique NameCB611166
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig426 contig Csv1_Contig426:1..632. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 3.359e-84
Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSD+SVQ DMKLWPFK+ AGPADKPMI V YKGEEK+FAAEEISSMVLIKMREIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   66 PVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 173

HSP 2 Score: 135.191 bits (339), Expect = 3.359e-84
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.359e-84
Identity = 97/108 (89.81%), Postives = 99/108 (91.67%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSD SVQ D+KLWPFKVI GP DKPMI V YKGEEKQFAAEEISSMVL KM+EIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   66 PINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 173

HSP 2 Score: 140.198 bits (352), Expect = 3.359e-84
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 7.454e-84
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSDASVQ DMKLWPFKVI GP DKPMI VNYKGEEKQF+AEEISSMVLIKM+EIAEA+LG T+KNAVVTVPAY NDSQRQATKDAGVI+GLNV
Sbjct:   66 PINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNV 173

HSP 2 Score: 138.658 bits (348), Expect = 7.454e-84
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTD+ERLIGDAAKNQVAMNP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.654e-83
Identity = 95/108 (87.96%), Postives = 101/108 (93.52%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSDASVQ DMKLWPFKVI GP DKPMI V YKGEEK+FAAEEISSMVL KM+EIAEA+LG+T+KNAVVTVPAYFNDSQRQATKDAGVI+GLNV
Sbjct:   66 PINTVFDAKRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNV 173

HSP 2 Score: 139.043 bits (349), Expect = 1.654e-83
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVA+NP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 6.827e-82
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSDASVQ D +LWPF +I+G A+KPMI V YKGEEKQFAAEEISSMVLIKMREIAEA+LG T+KNAVVTVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   66 PVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 173

HSP 2 Score: 136.346 bits (342), Expect = 6.827e-82
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.905e-82
Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRF+D+SVQ D+KLWPF + +GPA+KPMI VNYKGE+K+F+AEEISSM+LIKMREIAEAYLG TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   66 PINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 173

HSP 2 Score: 136.346 bits (342), Expect = 8.905e-82
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 2.578e-81
Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSDASVQ DMK  PFKV++GP +KPMIGVNYKGEEKQFAAEEISSMVL KM+EIAEAYLG+T+KNAVVTVPAYFNDSQRQATKDAGVI+GLNV
Sbjct:   66 PINTVFDAKRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNV 173

HSP 2 Score: 131.724 bits (330), Expect = 2.578e-81
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MAGKGEGPAIGIDLGTTYS VGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.816e-77
Identity = 92/108 (85.19%), Postives = 97/108 (89.81%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            PTNTVFDAKRLIGRRFS  +VQ  MKLWP + + G  DKPMI  NYKGEEKQFAAEEISSMVLIKM+EIAEAYLG+TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV
Sbjct:   65 PTNTVFDAKRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 171

HSP 2 Score: 132.109 bits (331), Expect = 2.816e-77
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1 
Query:  121 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 65
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.822e-76
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P NTVFDAKRLIGRRFSD+SVQ DMKLWPFKV   P DKPMI VNYKGEEK+F+AEEISSMVL+KMRE+AEA+LG  +KNAVVTVPAYFNDSQRQATKDAG I+GLNV
Sbjct:   65 PQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQATKDAGAISGLNV 172

HSP 2 Score: 120.553 bits (301), Expect = 6.822e-76
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 1 
Query:  127 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPR 312
            EG AIGIDLGTTYSCVGVWQ+DRVEII NDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP+
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQ 66
[Close]
BLAST of CB611166 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.149e-71
Identity = 88/108 (81.48%), Postives = 96/108 (88.89%), Query Frame = 3 
Query:  306 PTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNV 629
            P+NTVFDAKRLIGRRF+  SVQ DMKLWP +VI GP +KPMI VNYKGE KQFAAEEISSMVLIKM EIAEA+LG ++ +AVVTVPAYFNDSQRQATKD GVIAGLNV
Sbjct:   64 PSNTVFDAKRLIGRRFNHPSVQSDMKLWPLQVIPGPGEKPMIVVNYKGESKQFAAEEISSMVLIKMLEIAEAFLGHSVNDAVVTVPAYFNDSQRQATKDTGVIAGLNV 171

HSP 2 Score: 113.235 bits (282), Expect = 2.149e-71
Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 1 
Query:  112 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNP 309
            MA KG G AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSY  FTDT RLIGD AKNQVAMNP
Sbjct:    1 MASKG-GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYFAFTDTSRLIGD-AKNQVAMNP 64
The following BLAST results are available for this feature:
BLAST of CB611166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH3.359e-8491.67Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7C_PETHY3.359e-8489.81Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_SOLLC7.454e-8488.89Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_SOLLC1.654e-8387.96Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP72_ARATH6.827e-8287.04Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP73_ARATH8.905e-8285.19Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL2.578e-8187.96Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE2.816e-7785.19Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN6.822e-7683.33Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA2.149e-7181.48Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_A03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611166 ID=CB611166; Name=CB611166; organism=Citrus sinensis; type=EST; length=631bp
GGGAGAACCACATACAACTTTTTTATTTTTTAGATTTGAGATCTATTTTT
GTTTTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTT
GAGTTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGAT
TTGGGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGA
GATTATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGT
TCACCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCC
ATGAACCCACGAACACCGTCTTTGATGCAAAGAGGTTGATTGGTAGGAGA
TTCAGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGT
GATTGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCG
AAGAGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAG
ATGCGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGT
CGTTACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGG
ATGCCGGTGTCATTGCTGGGCTTAATGTGAT
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