CB611181

Overview
NameCB611181
Unique NameCB611181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:123..440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.380e-23
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD   AE +G C CGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.758e-18
Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1
Query:   94 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   + AE +G C CG  CAC +C CG
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCG 64          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.758e-18
Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTC 279
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V  AE+ G C CG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.296e-15
Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTC 279
            MS  C NCDC+D SQC KKG S+    VET+   + T V+MD   AE  GNC CGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDT-VIMDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.296e-15
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D   AE +G C CG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.924e-15
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V   E  G C CG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.924e-15
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V   E  G C CG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G C C   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CB611181 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.341e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQGAEAEGNCNCGPTCACVNCTCG 282
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G C C   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CB611181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA8.380e-2366.67Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC4.758e-1858.73Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE4.758e-1864.62Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV1.296e-1555.38Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.296e-1556.06Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ4.924e-1551.52Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI4.924e-1551.52Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ3.529e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.341e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_H03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611181 ID=CB611181; Name=CB611181; organism=Citrus sinensis; type=EST; length=318bp
GGGGACAGCAAAGCAACGCTAGTTTCGTACAATAAAGAGCCCTCTATTTC
CAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCG
GCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGC
TATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGT
TGTCATGGACGTTCAGGGTGCTGAGGCTGAAGGTAACTGCAACTGCGGCC
CCACCTGCGCTTGTGTGAACTGCACTTGTGGTACTCACTAATAATCAACC
CCATGCAACAAAAAATAA
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