CB611197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 8.039e-105 Identity = 194/226 (85.84%), Postives = 206/226 (91.15%), Query Frame = 1 Query: 16 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 MAAVG+++++PE+A EE C KGA+ KQGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 225
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 3.495e-100 Identity = 188/226 (83.19%), Postives = 199/226 (88.05%), Query Frame = 1 Query: 16 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 MAAVG+E + P +A EE C KGA+ KQGEGL +YYLQH+ ELQ R+K++NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 225
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 61 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP LFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 61 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP LFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 61 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP LFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 61 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP LFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 156/210 (74.29%), Postives = 174/210 (82.86%), Query Frame = 1 Query: 61 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP LFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 213
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 4.746e-81 Identity = 151/200 (75.50%), Postives = 168/200 (84.00%), Query Frame = 1 Query: 91 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHP FE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 9 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 208
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 300.442 bits (768), Expect = 6.198e-81 Identity = 150/203 (73.89%), Postives = 170/203 (83.74%), Query Frame = 1 Query: 82 KGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 + A +GEG R YY+Q I ELQL V +K NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV P+ RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHP LF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIR Sbjct: 10 ESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 212
BLAST of CB611197 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 3.076e-80 Identity = 146/196 (74.49%), Postives = 168/196 (85.71%), Query Frame = 1 Query: 103 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPVLFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 690 +G++ YY I EL+++V +K +L RLEAQRNELN+RVRMLKEELQLL PGS+V EVVK+MGKNKVLVKV+PEGK+VV PSTR AL+++SY LH ILP+K+DPLV+LMKVEK+PDSTYDM+GGLD+QIKEIKEVIELPIKHP LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR Sbjct: 14 KGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 209 The following BLAST results are available for this feature:
BLAST of CB611197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611197 ID=CB611197; Name=CB611197; organism=Citrus sinensis; type=EST; length=722bpback to top |