CB611204

Overview
NameCB611204
Unique NameCB611204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2610 contig Csv1_Contig2610:251..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_BOVIN (Coiled-coil domain-containing protein 25 OS=Bos taurus GN=CCDC25 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.893e-51
Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 1
Query:  160 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +    +  YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRL 133          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_PONAB (Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 94/133 (70.68%), Postives = 113/133 (84.96%), Query Frame = 1
Query:  160 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +    +  YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRL 133          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_HUMAN (Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 94/133 (70.68%), Postives = 113/133 (84.96%), Query Frame = 1
Query:  160 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +    +  YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL
Sbjct:    1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRL 133          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_DANRE (Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50
Identity = 94/132 (71.21%), Postives = 111/132 (84.09%), Query Frame = 1
Query:  160 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +   +  +TI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLR+ KG TIDDI + VL DC QLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH  K V+ V VEK+INEIVNRL
Sbjct:    1 MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTIDDIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVAVEKKINEIVNRL 132          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_MOUSE (Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.820e-50
Identity = 94/133 (70.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:  160 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +    +  YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL KG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL
Sbjct:    1 MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRL 133          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_XENTR (Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis GN=ccdc25 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.111e-49
Identity = 95/132 (71.97%), Postives = 113/132 (85.61%), Query Frame = 1
Query:  160 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MVFYF +   +  YT++MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL K QTI+DI + VL DCAQLVKANSIQG K+NNI+VVYTPWANLKKTA MD+GQ+GFH  K V+T+ VEK +++IVNRL
Sbjct:    1 MVFYFTSNVISPPYTMYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKDQTIEDIPKEVLLDCAQLVKANSIQGCKMNNINVVYTPWANLKKTADMDIGQIGFHRQKDVKTMTVEK-VSKIVNRL 131          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: CCD25_DICDI (Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium discoideum GN=ccdc25 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.584e-40
Identity = 76/132 (57.58%), Postives = 103/132 (78.03%), Query Frame = 1
Query:  160 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRL 555
            MV YFK      +Y  +MG+DK+ENE+LIKYG+PED+WFHV+ +SSAHVYLRL KG+T +DI   +LE+C QLVK NSIQG K  ++D+VYTPWANLKKTA M+ GQV +HN + V+ V+  ++ ++I+NR+
Sbjct:    1 MVLYFKLIDP--EYICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETWNDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYVRNVRKDSKIINRI 130          
BLAST of CB611204 vs. ExPASy Swiss-Prot
Match: JLP2_YEAST (Protein JLP2 OS=Saccharomyces cerevisiae GN=JLP2 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26
Identity = 61/138 (44.20%), Postives = 91/138 (65.94%), Query Frame = 1
Query:  160 MVFYFKARPE--AGDYTIFMGLDKYENEELIKYGFPE--DIWFHVDKMSSAHVYLRLHKGQ-TIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLS 558
            MV++++++P   +  Y I MG DK+EN+ LIK+ + E   +WFH DK SS HVYL+L   + TIDDI + V+ DC QL K+ SIQGNK+    ++ TPW NL+K   M+ G+V F + +  R ++   R N+I+NRL+
Sbjct:    1 MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPNEKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQCRKMECGARDNKILNRLA 138          
The following BLAST results are available for this feature:
BLAST of CB611204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CCD25_BOVIN5.893e-5171.43Coiled-coil domain-containing protein 25 OS=Bos ta... [more]
CCD25_PONAB1.715e-5070.68Coiled-coil domain-containing protein 25 OS=Pongo ... [more]
CCD25_HUMAN1.715e-5070.68Coiled-coil domain-containing protein 25 OS=Homo s... [more]
CCD25_DANRE1.715e-5071.21Coiled-coil domain-containing protein 25 OS=Danio ... [more]
CCD25_MOUSE3.820e-5070.68Coiled-coil domain-containing protein 25 OS=Mus mu... [more]
CCD25_XENTR1.111e-4971.97Coiled-coil domain-containing protein 25 OS=Xenopu... [more]
CCD25_DICDI3.584e-4057.58Coiled-coil domain-containing protein 25 homolog O... [more]
JLP2_YEAST2.945e-2644.20Protein JLP2 OS=Saccharomyces cerevisiae GN=JLP2 P... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_E09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611204 ID=CB611204; Name=CB611204; organism=Citrus sinensis; type=EST; length=587bp
GCGGGGGTCATGAGGGAAAAAGGATATCTGATAACCAAACAACAAAACCT
AAAAAACTGAAACCGCATTTATGATTACATAATTTTTCAGCGATCTGCAG
TAAGAAAGAGGGAGAAGGAAAACGCAAGGAGTCTGTGGTCTCAAGAGCGA
CGACGAAAGATGGTGTTTTACTTCAAAGCCCGACCAGAGGCCGGCGATTA
CACAATTTTCATGGGTCTCGACAAGTACGAGAACGAGGAACTGATCAAAT
ACGGCTTCCCCGAAGACATTTGGTTTCATGTGGATAAAATGTCTTCTGCT
CATGTGTATTTGAGATTACACAAAGGCCAAACTATTGATGATATTAGTGA
AGGCGTATTGGAAGATTGTGCTCAGCTTGTCAAAGCTAATTCCATTCAAG
GCAATAAGGTGAATAACATTGATGTTGTTTATACACCTTGGGCCAATTTG
AAGAAAACTGCTTCCATGGATGTTGGCCAAGTTGGTTTCCACAATCCGAA
GATGGTTCGGACAGTGAAAGTGGAGAAAAGAATAAATGAGATAGTTAATA
GATTGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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