CB611215

Overview
NameCB611215
Unique NameCB611215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length320
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:25..345. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.385e-17
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            M+T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAG+VRI IL+TA+CHT
Sbjct:    1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHT 49          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.362e-17
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            A ST+GQVITCKAAVAWE NK + IEDVQVAPPQAG+VR+ ILFTA+CHT
Sbjct:    2 ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHT 51          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.362e-17
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            A  T+GQVITCKAAVA+EPNK LVIEDVQVAPPQAG+VR+ ILFTA+CHT
Sbjct:    2 ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHT 51          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.261e-17
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 3
Query:  171 AMSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            A ST+GQVITCKAAVAWE N+ + IEDVQVAPPQAG+VR+ ILFTA+CHT
Sbjct:    2 ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHT 51          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.871e-17
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            +T+GQVITCKAAVAWEPNK L IEDV+VAPPQA +VRI ILFTA+CHT
Sbjct:    1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHT 48          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.692e-15
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            MSTEG+VITCKAAVAWE  K LVIED++V PPQ G+VRI IL+T VCHT
Sbjct:    1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHT 49          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.444e-14
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            +T GQVI C+AAVAWE  K LVIE+V+VAPPQAG+VR+ ILFT++CHT
Sbjct:    3 NTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHT 50          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.111e-14
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 3
Query:  174 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            MST GQ+I CKAAVAWE  K LVIE+V+VAPPQ  +VRI ILFT++CHT
Sbjct:    1 MSTTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHT 49          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.287e-14
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            +T GQ+I C+AAVAWE  K LVIE+V+VAPPQAG+VR+ ILFT++CHT
Sbjct:    3 NTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHT 50          
BLAST of CB611215 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.584e-13
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 3
Query:  177 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGQVRITILFTAVCHT 320
            +T GQVI C+AAVAWE  K LVIE+V+VAPPQA +VRI ILFT++CHT
Sbjct:    3 NTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHT 50          
The following BLAST results are available for this feature:
BLAST of CB611215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADHX_ARATH1.385e-1783.67Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSI2.362e-1780.00Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE2.362e-1782.00Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ORYSJ5.261e-1778.00Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA6.871e-1781.25Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_DICDI1.692e-1575.51Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_TRIRP5.444e-1470.83Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_ARATH7.111e-1471.43Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PEA9.287e-1468.75Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH_MALDO1.584e-1370.83Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_D02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611215 ID=CB611215; Name=CB611215; organism=Citrus sinensis; type=EST; length=320bp
GGGGGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTTAGAAAAATCT
CACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGTCCCTTTGAAT
AATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGTCTGTTTTTCAT
TCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTCAAGTCATCACA
TGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTGGTGATTGAGGA
TGTGCAGGTTGCTCCGCCTCAGGCTGGCCAGGTTCGAATCACGATTCTCT
TCACTGCTGTCTGCCACACT
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