CB611230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.422e-41 Identity = 85/112 (75.89%), Postives = 94/112 (83.93%), Query Frame = 3 Query: 54 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 383 M Q TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +I+EVAG PYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GGG EKKK Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.218e-40 Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 3 Query: 75 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGG--EKKK 383 TGLFVGLNKGH+VTK+E PPRP +RKGKTSKR F+R +I+EVAG PYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ G G EKKK Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.878e-39 Identity = 82/105 (78.10%), Postives = 90/105 (85.71%), Query Frame = 3 Query: 75 TGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGG---GEKK 380 TGLFVGLNKGH+VT++EL PRP RKGKTSKR F+R +IREVAG PYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+ LRK R+ GG EKK Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 5.654e-36 Identity = 74/91 (81.32%), Postives = 80/91 (87.91%), Query Frame = 3 Query: 54 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE 326 MAPKQPNTGLFVGLNKGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRITELLKVGKDKRALKV + K+G H + K+ E Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.636e-30 Identity = 66/96 (68.75%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGE 374 VGLNKGH VTKK PRP+ RKG S+RV VR V+REVAG+ PYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ LRK +A GE Sbjct: 6 VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 3.110e-26 Identity = 54/93 (58.06%), Postives = 76/93 (81.72%), Query Frame = 3 Query: 78 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 GL VGLNKG ++TK++LP RP+ RKG+ SKR FVR+++REVAGF PYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ SR Sbjct: 4 GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.047e-26 Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 81 LFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKK 380 L VGL KGH VTK E PRP+ RKG SK FVR +IREV GF P+E+R ELLKV KDKRALK K++LGTH R K+KR+E+SN L R ++K Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAAAHKEK 106
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.016e-25 Identity = 54/93 (58.06%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 78 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 GL VGLNKG +TK++LP RP+ RKG SKR FVR+++REVAGF PYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ SR Sbjct: 4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.706e-24 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR R+G+ +K FVR +IREV GF PYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CB611230 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.706e-24 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFTPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR R+G+ +K FVR +IREV GF PYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98 The following BLAST results are available for this feature:
BLAST of CB611230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611230 ID=CB611230; Name=CB611230; organism=Citrus sinensis; type=EST; length=437bpback to top |