CB611238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: AGD9_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS=Arabidopsis thaliana GN=AGD9 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.259e-28 Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 118 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 MA++NLTDKN+VFRKLK+KSENK+CFDC+AKNPTWASV YGIFLCIDCSAVHRSLGVHISFVR T Sbjct: 1 MATENLTDKNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRST 65
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: AGD8_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.663e-28 Identity = 55/64 (85.94%), Postives = 62/64 (96.88%), Query Frame = 1 Query: 121 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 ++DNLTDKN+VFRKLK+KSENK+CFDC+AKNPTWASVTYGIFLCIDCSA HR+LGVHISFVR T Sbjct: 5 SADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVRST 68
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: AGD10_ARATH (ADP-ribosylation factor GTPase-activating protein AGD10 OS=Arabidopsis thaliana GN=AGD10 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 1 Query: 118 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 MAS+NL DK VF+KLKAKS+NK+CFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVR T Sbjct: 1 MASENLNDKISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRST 65
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG2_PONAB (ADP-ribosylation factor GTPase-activating protein 2 OS=Pongo abelii GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.811e-20 Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 121 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 A N T+ +F++L+A NK CFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF+R T Sbjct: 3 AEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRST 66
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG2_HUMAN (ADP-ribosylation factor GTPase-activating protein 2 OS=Homo sapiens GN=ARFGAP2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.811e-20 Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 121 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 A N T+ +F++L+A NK CFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF+R T Sbjct: 3 AEPNKTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRST 66
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG2_BOVIN (ADP-ribosylation factor GTPase-activating protein 2 OS=Bos taurus GN=ARFGAP2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 121 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 A N T+ F++L+A NK CFDC AKNP+WAS+TYG+FLCIDCS VHRSLGVH+SF+R T Sbjct: 3 AEPNKTEIQTFFKRLRAIPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRST 66
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG2_MOUSE (ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus GN=Arfgap2 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.068e-19 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 121 ASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 AS + T+ +F++L+A NK CFDC AK+P+WAS+TYG+FLCIDCS VHRSLGVH+SF+R T Sbjct: 3 ASPSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRST 66
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG2_XENTR (ADP-ribosylation factor GTPase-activating protein 2 OS=Xenopus tropicalis GN=arfgap2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.924e-19 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 151 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 VF++L+A NK CFDC AKNP+WAS+ YG+FLCIDCS VHRSLGVH+SF+R T Sbjct: 13 VFKRLRAAPTNKSCFDCGAKNPSWASIPYGVFLCIDCSGVHRSLGVHLSFIRST 66
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: YQP4_CAEEL (Uncharacterized protein F07F6.4 OS=Caenorhabditis elegans GN=F07F6.4 PE=4 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 9.043e-19 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 139 DKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 D RK++A NK+CFDC A+NPTW +VTYG+FLCIDCSAVHR+LGVH++FVR T Sbjct: 11 DLQTAMRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRST 68
BLAST of CB611238 vs. ExPASy Swiss-Prot
Match: ARFG3_PONAB (ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii GN=ARFGAP3 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.181e-18 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 118 MASDNLTDKNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRIT 312 M + D +F++L++ NK+CFDC AKNP+WAS+TYG+FLCIDCS HRSLGVH+SF+R T Sbjct: 1 MGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRST 65 The following BLAST results are available for this feature:
BLAST of CB611238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611238 ID=CB611238; Name=CB611238; organism=Citrus sinensis; type=EST; length=448bpback to top |