CB611248

Overview
NameCB611248
Unique NameCB611248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB611248 vs. ExPASy Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.605e-14
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:    6 SCYSTKHVSADGP-ITYIVKEEFEVGSNEKDSRAFDVLYNASDLEVLCVCGLFNFRGYLCRHILCVL 203
            SC+ST  V  DGP + ++VKE     S+ ++ R F+VLYN S  EV C+C  FNF GYLCRH LCVL
Sbjct:  550 SCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALCVL 616
The following BLAST results are available for this feature:
BLAST of CB611248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FRS6_ARATH5.605e-1453.73Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIIaF_C05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIIaF_C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611248 ID=CB611248; Name=CB611248; organism=Citrus sinensis; type=EST; length=382bp
GGAACTCTTGCTATAGCACAAAACATGTTAGTGCTGATGGACCTATAACA
TACATAGTGAAGGAAGAATTCGAGGTTGGTAGCAACGAGAAAGATTCAAG
GGCTTTCGATGTTTTGTACAATGCCTCCGACTTAGAGGTGCTTTGTGTTT
GTGGGTTGTTCAATTTCAGAGGATATTTATGCAGACACATTCTTTGTGTT
CTAACCAGAGTGGCGTGCAGGGGATCCCATCTCAGTACATTCTTTCTCGA
TGGAGAAAAGATGTTAAACGTTCTTATGTTCTTGATCACAGCTGCAGTGG
CATTGATATTAAAAATCCGGTGCACAGGTATGATGATTTGTACAAACGCA
TCGGGCAGGTCGTAAAGGAGGGCAGGCTATCT
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