CB611250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 5.610e-23 Identity = 62/135 (45.93%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANG+R IGELIAKA EK + + KT + EL++ GM LDRGY SPYFITN KT++C L DP I+I EK+ S+ + E+ R+ +L++ ED+E+D LA+L+LN Sbjct: 165 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFN-ELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQ---RPLLIVSEDVESDALATLILN 295 HSP 2 Score: 24.6386 bits (52), Expect = 5.610e-23 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 218 DQRQGARMAIDALVGNLYSTTHHI 289 D R+G MA+DA+V NL S I Sbjct: 145 DLRRGISMAVDAVVTNLKSKARMI 168
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.298e-23 Identity = 60/135 (44.44%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANGDR IGELIAKA E + + KT + EL++ GM +DRGY+SPYFITN KT++C L DP I+I EK+ SN + + ++ + +L++ ED+E+D LA+L+LN Sbjct: 166 ARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISN---INAMVKVLELALKKQRPLLIVAEDVESDALATLILN 296 HSP 2 Score: 23.483 bits (49), Expect = 7.298e-23 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 218 DQRQGARMAIDALVGNLYSTTHHI 289 D R+G ++A+D +V NL S I Sbjct: 146 DLRRGIKLAVDTVVTNLQSRARMI 169
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.608e-22 Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++ KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EK+ S+ + E+ R+ +L++ ED+E+D LA+L+LN Sbjct: 166 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISSINSVVKVLELALKRQ---RPLLIVSEDVESDALATLILN 296 HSP 2 Score: 23.483 bits (49), Expect = 1.608e-22 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 218 DQRQGARMAIDALVGNLYSTTHHI 289 D R+G MA+D++V NL S I Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMI 169
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.092e-22 Identity = 58/135 (42.96%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++ KT + EL++ GM LDRGY+SPYFITN K ++C L DP I+I EK+ S+ + + ++ + +L++ ED+E++ LA+L+LN Sbjct: 166 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISS---INAVVKVLELALKKQRPLLIVSEDVESEALATLILN 296 HSP 2 Score: 23.483 bits (49), Expect = 2.092e-22 Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 218 DQRQGARMAIDALVGNLYSTTHHI 289 D R+G MA+D++V NL S I Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMI 169
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 56/135 (41.48%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANG+R IGELIAKA EK + +A T + EL++ GM LDRGY+SPYFITN KT++C L DP I+I +K+ +N + ++ + +L++ ED+E++ L +L++N Sbjct: 168 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQKPLLIVAEDVESEALGTLIIN 298
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20 Identity = 55/135 (40.74%), Postives = 86/135 (63.70%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 A+ I++ E+IA GT +ANG+R IGELIAKA EK + +A T + EL++ GM LDRGY+SPYFITN K ++C L DP I+I +K+ +N + ++ + +L++ ED+E++ L +L++N Sbjct: 168 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIIN 298
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60_METPB (60 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groL PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19 Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 273 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRR---YNGXDVLMIXEDIENDLLASLVLN 677 A+ + S E++A GT +ANGD+ IGE+IA A +K + + KT + EL + GM DRGYLSPYF+TN + L DPYI+I EK+ S+ L + PV G +L+I EDIE + LA+LV+N Sbjct: 135 AKKVASSEEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEAKTAET-ELDVVEGMQFDRGYLSPYFVTNAEKMVAELEDPYILIHEKKLSS------LQPMLPVLEAVVQTGKPLLIIAEDIEGEALATLVVN 265
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60_RHOMR (60 kDa chaperonin OS=Rhodothermus marinus GN=groL PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19 Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 225 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEK-GWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 DK +E + L ++ +Q + +IA T +ANGD+ IG+LIA AFEK G + V A+ T ++E+ GM DRGYLSPYF+TN T E VL D YI+I +K+ S DLL + V + G +L+I ED+E + LA+LV+N Sbjct: 121 DKAVEVVVAELRKM--SQEVQDKNRIAQVATISANGDKAIGQLIADAFEKVGKDGVITVEEAKGTETTLEV--VEGMQFDRGYLSPYFVTNPDTMEAVLEDAYILIHDKKIS--AMKDLLPILEKVVQ-TGRPLLIIAEDVEGEALATLVVN 265
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60_METRJ (60 kDa chaperonin OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 264 IYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPVRRYNGXDVLMIXEDIENDLLASLVLN 677 I A+ +++ +++A GT +ANGD+ IGE+IA A +K + + KT + EL + GM DRGYLSPYFITN + L DPYI+I EK+ S+ + + G +L+I EDIE + LA+LV+N Sbjct: 132 IARAKKVSTSDEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEAKTAET-ELDVVEGMQFDRGYLSPYFITNAEKMVAELEDPYILIHEKKLSS---LQAMLPVLEAVVQTGKPLLIIAEDIEGEALATLVVN 265
BLAST of CB611250 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 225 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEK-GWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKRFSNCVFFDLLTEIGPV---RRYNGXDVLMIXEDIENDLLASLVLN 677 DK + ++ L +I ++PI ++IA G +AN D IG+LIA+A EK G + V A+ T EL++ GM DRGYLSPYF+TN + E VL +PYI+I +K+ SN + E+ P+ +G +L+I E+IE + LA+LV+N Sbjct: 121 DKAVTGVIIELKKI--SRPIADKKEIAQVGCISANNDSEIGDLIAEAMEKVGKDGVITVEEAKGT--ETELKVVEGMQFDRGYLSPYFVTNADSMEAVLDEPYILIYDKKISN------MKELLPILEKTAQSGRPLLIIAEEIEGEALATLVVN 265 The following BLAST results are available for this feature:
BLAST of CB611250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611250 ID=CB611250; Name=CB611250; organism=Citrus sinensis; type=EST; length=685bpback to top |