CF417097

Overview
NameCF417097
Unique NameCF417097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7351 contig Csv1_Contig7351:134..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF417097 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.126e-52
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 2 
Query:  197 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMLESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAWVLQLVGM 664
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  L++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGEA  + + G+
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAGL 200
The following BLAST results are available for this feature:
BLAST of CF417097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH1.126e-5262.18Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-027 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_C7 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417097 ID=CF417097; Name=CF417097; organism=Citrus sinensis; type=EST; length=690bp
TTCACAGTCTCTCCGATTCAGCAGCTGTTTAGTTCGCATGGCGTCTCCTC
CCACCAAGGATGCTCCCGCTGATAAGAAAGCAGAAGGATCGACCCCTAAG
TCAGAAGCAACTTCGGGGTCTGTTAGAGACTCATCTAGTTCGCCTTCCGG
TGCTTCTGCTGCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCCAAATC
CTTTTGATTTCTCCGCCATGAGTGGCCTTCTTAATGATCCGAGCATTAAG
GAACTAGCTGAACAGATTGCGAAAGATCCAGCATTCAATTCCATGGCCGA
GCAACTTCAGAAAACTTTGCATGGTGCAAATGCTGAGGAGAGTATTCCAC
AGTTTGACACAACACAGTATTACTCCACCATGCAACAGGTTATGCAGAAT
CCTCAGTTTATGACTATGGCTGAGCGCCTTGGTAATGCTTTAATGCAGGA
CCCATCAATGTCTCATATGCTGGAGAGTTTGACAAACCCTACAAAAAAAG
ACCAGATCGAGGAAAGAATGGCAAAAATCAAGGAAGATCCCTCTTTGAAG
CCTATTTTGGATGAGATAGAGTCTGGTGGACCATCTGCTATGATGAAGTA
CTGGAATGATAAAGATGTTTTGCAGAAATTGGGTGAAGCATGGGTCTTGC
AGTTGGTGGGGATGCGACCACTTCTGCTGATATGCGGGGG
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