CF417112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417112 vs. ExPASy Swiss-Prot
Match: VDE_SPIOL (Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea GN=VDE1 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 2.525e-44 Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1 Query: 1 NKFIRTDNTCGPEPPLVERLEKKVEEGERTIIKEVEQLEGEVE----KVGRTEMTLFQRLAEGFKELQKDEEKFLRELSKEEMDLLSELKMEASEVENLFGRALPVKKIR 318 NKFIRTDNTCGPEPPLVERLEK VEEGERTIIKEVEQLEGE+E KVG+TEMTLFQRL EGF+ELQKDEE FL+EL+KEE +LL +LKMEA EVE LFGRALP++K+R Sbjct: 363 NKFIRTDNTCGPEPPLVERLEKTVEEGERTIIKEVEQLEGEIEGDLEKVGKTEMTLFQRLLEGFQELQKDEEYFLKELNKEERELLEDLKMEAGEVEKLFGRALPIRKLR 472
BLAST of CF417112 vs. ExPASy Swiss-Prot
Match: VDE_TOBAC (Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum GN=VDE1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 3.086e-42 Identity = 84/106 (79.25%), Postives = 95/106 (89.62%), Query Frame = 1 Query: 1 NKFIRTDNTCGPEPPLVERLEKKVEEGERTIIKEVEQLEGEVEKVGRTEMTLFQRLAEGFKELQKDEEKFLRELSKEEMDLLSELKMEASEVENLFGRALPVKKIR 318 N FI+TDNTCGPEPPLVERLEKKVEEGERTIIKEVE++E EVEKV E+TLF +L EGFKELQ+DEE FLRELSKEEMD+L LKMEA+EVE LFGRALP++K+R Sbjct: 373 NTFIKTDNTCGPEPPLVERLEKKVEEGERTIIKEVEEIEEEVEKVRDKEVTLFSKLFEGFKELQRDEENFLRELSKEEMDVLDGLKMEATEVEKLFGRALPIRKLR 478
BLAST of CF417112 vs. ExPASy Swiss-Prot
Match: VDE_ARATH (Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana GN=VDE1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 9.929e-41 Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 7 FIRTDNTCGPEPPLVERLEKKVEEGERTIIKEVEQLEGEVEK----VGRTEMTLFQRLAEGFKELQKDEEKFLRELSKEEMDLLSELKMEASEVENLFGRALPVKKIR 318 FIRTDNTCGPEP LVER+EK VEEGER I+KEVE++E EVEK VGRTEMTLFQRLAEGF EL++DEE F+RELSKEEM+ L E+KMEASEVE LFG+ALP++K+R Sbjct: 355 FIRTDNTCGPEPALVERIEKTVEEGERIIVKEVEEIEEEVEKEVEKVGRTEMTLFQRLAEGFNELKQDEENFVRELSKEEMEFLDEIKMEASEVEKLFGKALPIRKVR 462
BLAST of CF417112 vs. ExPASy Swiss-Prot
Match: VDE_LACSA (Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa GN=VDE1 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.024e-38 Identity = 78/110 (70.91%), Postives = 93/110 (84.55%), Query Frame = 1 Query: 1 NKFIRTDNTCGPEPPLVERLEKKVEEGERTIIKEV----EQLEGEVEKVGRTEMTLFQRLAEGFKELQKDEEKFLRELSKEEMDLLSELKMEASEVENLFGRALPVKKIR 318 N FI TDN+CGPEPPLVERLEK EEGE+ +IKE E++E EVEKV TEMTLFQRL EGFKELQ+DEE F+RELSKEE ++L+EL+MEA+EVE LFGRALP++K+R Sbjct: 364 NNFITTDNSCGPEPPLVERLEKTAEEGEKLLIKEAVEIEEEVEKEVEKVRDTEMTLFQRLLEGFKELQQDEENFVRELSKEEKEILNELQMEATEVEKLFGRALPIRKLR 473 The following BLAST results are available for this feature:
BLAST of CF417112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417112 ID=CF417112; Name=CF417112; organism=Citrus sinensis; type=EST; length=475bpback to top |