CF417117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_SCHPO (Eukaryotic translation initiation factor 2 subunit alpha OS=Schizosaccharomyces pombe GN=tif211 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.846e-53 Identity = 107/204 (52.45%), Postives = 137/204 (67.16%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAI 614 V+VLRVDKEKGYIDLSKRRVS ED+ CEER+NKSK VHSIMRH+AE + LE +Y IGWPLY KYGHA++AFK+ +++PD V L P + + D L+ I RR+TPQP+KIRADVE+ CF ++G+ IK A++ AE + P+K+KLVAPPLYVL T LDK G+ L +AI A ++I Sbjct: 71 VVVLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEKHNVPLETMYTTIGWPLYRKYGHAYDAFKLAISNPDHVFEGLE-----------------PPKSGVIND-LLAQISRRLTPQPIKIRADVEVTCFGYEGINAIKAALKAAEDVHTEEVPIKVKLVAPPLYVLLTNALDKSLGLKKLEEAIGAIEKSI 256
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_YEAST (Eukaryotic translation initiation factor 2 subunit alpha OS=Saccharomyces cerevisiae GN=SUI2 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.759e-49 Identity = 106/205 (51.71%), Postives = 131/205 (63.90%), Query Frame = 3 Query: 6 MVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 +VLRVDKEKGYIDLSKRRVS EDI CEE+Y KSK VHSI+R+ AE I LEELY I WPL K+GHA+EAFK+ + D + V + I +++V D L I +R+TPQ +KIRADVE+ CF ++G+ IKDA++ AE VK+KLVA PLYVLTT LDK++GI L AI TE I K Sbjct: 72 VVLRVDKEKGYIDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQIPLEELYKTIAWPLSRKFGHAYEAFKLSIID-------------------ETVWEGIEPPSKDVLDELKNYISKRLTPQAVKIRADVEVSCFSYEGIDAIKDALKSAEDMSTEQMQVKVKLVAAPLYVLTTQALDKQKGIEQLESAIEKITEVITK 257
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_XENTR (Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus tropicalis GN=eif2s1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 7.278e-42 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDK+KGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE LY W KY A++AFK V+DPD VL+ L + E+ + L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +KDA+R + + P+KI L+APP YV+TT TL++ +G+SVLN+A++ E IE+ Sbjct: 71 VVVIRVDKDKGYIDLSKRRVSPEEALKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLYQRTAWVFDEKYKKPGYGAYDAFKHAVSDPD-VLDGLD-------------------LNEDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKDALRAGLSCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMSVIKERIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_CHICK (Eukaryotic translation initiation factor 2 subunit 1 OS=Gallus gallus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.278e-42 Identity = 95/214 (44.39%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP ++L+SL +TEE + L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R + P+KI L+APP YV+TT TL++ +G+SVLN+A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-AILDSLD-------------------LTEEERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_RAT (Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus GN=Eif2s1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.241e-41 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL + E+ ++ L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R P+KI L+APP YV+TT TL++ +G+SVLN+A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSLD-------------------LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_MOUSE (Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus GN=Eif2s1 PE=1 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.241e-41 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL + E+ ++ L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R P+KI L+APP YV+TT TL++ +G+SVLN+A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSLD-------------------LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_BOVIN (Eukaryotic translation initiation factor 2 subunit 1 OS=Bos taurus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.241e-41 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL + E+ ++ L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R P+KI L+APP YV+TT TL++ +G+SVLN+A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSLD-------------------LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_PONAB (Eukaryotic translation initiation factor 2 subunit 1 OS=Pongo abelii GN=EIF2S1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.766e-41 Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL + E+ ++ L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R + P+KI L+APP YV+TT TL++ +G+SVL++A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSLD-------------------LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_HUMAN (Eukaryotic translation initiation factor 2 subunit 1 OS=Homo sapiens GN=EIF2S1 PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 2.766e-41 Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL + E+ ++ L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +K+A+R + P+KI L+APP YV+TT TL++ +G+SVL++A+A E IE+ Sbjct: 71 VVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSLD-------------------LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEE 264
BLAST of CF417117 vs. ExPASy Swiss-Prot
Match: IF2A_XENLA (Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus laevis GN=eif2s1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.612e-41 Identity = 91/214 (42.52%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 3 VMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKNIRRRMTPQPLKIRADVEMKCFQFDGVLHIKDAMRKAEAAGNNDCPVKIKLVAPPLYVLTTXTLDKEQGISVLNKAIAACTEAIEK 620 V+V+RVDK+KGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L L+ L+ W KY A++AFK V+DPD + DG +++ E+ + L+ NI RR+TPQ +KIRAD+E+ C+ ++G+ +KDA+R + + P+KI L+APP YV+TT TL++ +G+SVLN+A++ E IE+ Sbjct: 71 VVVIRVDKDKGYIDLSKRRVSPEEALKCEDKFTKSKTVYSILRHVAEVLDYTKDEQLDSLFQRTAWVFDEKYKKPGYGAYDAFKNAVSDPDIL-------------DGLDLS-------EDERRVLIDNINRRLTPQAVKIRADIEVACYGYEGIDAVKDALRAGLSCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMSVIKERIEE 264 The following BLAST results are available for this feature:
BLAST of CF417117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417117 ID=CF417117; Name=CF417117; organism=Citrus sinensis; type=EST; length=622bpback to top |