CF417156

Overview
NameCF417156
Unique NameCF417156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1731 contig Csv1_Contig1731:252..945. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_XENLA (Transmembrane protein 205 OS=Xenopus laevis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.543e-22
Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 3
Query:    9 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNR 386
            +K+ HLL  S +WG   W+TF+ G ++ K +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+    ++          F+P+T + M + H +ERE ++G  VG + N+
Sbjct:   11 VKIFHLLVLSASWGMQCWMTFVAGFVLIKGVPRHTFGLVQSKLFPYYNHIVLCCSFISLAIYAAYHPRELLSPSESVQISLFFTSLLVAALQARWFSPVTTKTMFKMHVIEREHSLGQGVGLSANK 136          

HSP 2 Score: 29.261 bits (64), Expect = 1.543e-22
Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  397 KSNPKLAAMNKKFGMIHGLSSLANIM 474
            + +PK  A+ K+F   HG+SSL N++
Sbjct:  144 EKDPKYKALRKRFMRYHGISSLCNLL 169          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_XENTR (Transmembrane protein 205 OS=Xenopus tropicalis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.353e-20
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 3
Query:    9 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNR 386
            ++  HLL  S +WG   W TF+ G ++ + +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+            +   F+P+T + M + H +ERE ++G  VG + NR
Sbjct:   11 VRTIHLLVLSASWGMQCWTTFVAGFVLIRGVPRHTFGLVQSKLFPFYNHIVLCCSFISLAIYAAYHPRELLSPSESVQITLFFVCLLAAALHARWFSPVTTKTMFKMHIIEREHSLGQGVGLSANR 136          

HSP 2 Score: 27.7202 bits (60), Expect = 1.353e-20
Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  397 KSNPKLAAMNKKFGMIHGLSSLANIM 474
            + +PK  A+ ++F   HG+SSL N++
Sbjct:  144 EKDPKYKALRQRFMRYHGISSLCNLL 169          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_MOUSE (Transmembrane protein 205 OS=Mus musculus GN=Tmem205 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.439e-19
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 3
Query:    9 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV 368
            +K+ HLL  S AWG  +WVTFI G ++F++LPRH FG +QSK+FP YF +   C  I +   A    W   +  E  QL  LL +      N       T  +M+    +E+E  +G EV
Sbjct:   11 IKVIHLLVLSGAWGMQVWVTFISGFLLFRSLPRHTFGLVQSKVFPVYFHVSLGCAFINLCILAPQRAWIHLTLWEVSQLSLLLLSLTLATINARWLEARTTAVMRALQSIEKERGLGTEV 130          

HSP 2 Score: 29.261 bits (64), Expect = 2.439e-19
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  403 NPKLAAMNKKFGMIHGLSSLANI 471
            +PK +A+ +KF   HGLSSL N+
Sbjct:  147 DPKYSALRRKFYHYHGLSSLCNL 169          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_HUMAN (Transmembrane protein 205 OS=Homo sapiens GN=TMEM205 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18
Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 3
Query:    9 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV 368
            +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  I +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV
Sbjct:   11 IKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFINLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEV 130          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_DANRE (Transmembrane protein 205 OS=Danio rerio GN=tmem205 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.422e-18
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 3
Query:    6 FLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNR 386
            F+K+ HLL  S  WG  +WV+FI G ++   +  H FG +QSK+FP YF  +    ++++A +A  HP +     E  Q+     A      N   F P   E M    ++E+E  +G++VG + NR
Sbjct:   10 FVKVLHLLVISFTWGMQVWVSFIAGFVLISQVSMHTFGLVQSKLFPVYFYCLLGGNAVSLAVYAVYHPRELLDWHEGIQMSLFFVAVIMAGLNAQWFGPSATENMLVMQEIEKEHGLGNQVGMSSNR 136          

HSP 2 Score: 28.1054 bits (61), Expect = 7.422e-18
Identity = 13/39 (33.33%), Postives = 21/39 (53.85%), Query Frame = 1
Query:  397 KSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLA 513
            + +PK       F   HGLS+L N++ F  + ++  YLA
Sbjct:  144 EQDPKYKEHRSTFYRYHGLSNLCNLIGFFCITVNLIYLA 182          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_PONAB (Transmembrane protein 205 OS=Pongo abelii GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18
Identity = 45/120 (37.50%), Postives = 62/120 (51.67%), Query Frame = 3
Query:    9 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV 368
            +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  + +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV
Sbjct:   11 IKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEV 130          
BLAST of CF417156 vs. ExPASy Swiss-Prot
Match: TM205_BOVIN (Transmembrane protein 205 OS=Bos taurus GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 45/119 (37.82%), Postives = 59/119 (49.58%), Query Frame = 3
Query:   12 KLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV 368
            K+ HLL  S AWG  +WVTFI G ++F+ LPRH FG +QSK+FP YF +   C  + +   A    W   +  E  QL  LL +      N       T   M     VE+E  +G EV
Sbjct:   12 KVVHLLVLSGAWGMQMWVTFISGFVLFRGLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQCSWAQLTFWEASQLFLLLLSLTLATINARWLESRTTAAMWALQTVEKERGLGGEV 130          
The following BLAST results are available for this feature:
BLAST of CF417156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TM205_XENLA1.543e-2235.71Transmembrane protein 205 OS=Xenopus laevis GN=tme... [more]
TM205_XENTR1.353e-2034.92Transmembrane protein 205 OS=Xenopus tropicalis GN... [more]
TM205_MOUSE2.439e-1937.50Transmembrane protein 205 OS=Mus musculus GN=Tmem2... [more]
TM205_HUMAN7.015e-1838.33Transmembrane protein 205 OS=Homo sapiens GN=TMEM2... [more]
TM205_DANRE7.422e-1833.07Transmembrane protein 205 OS=Danio rerio GN=tmem20... [more]
TM205_PONAB9.162e-1837.50Transmembrane protein 205 OS=Pongo abelii GN=TMEM2... [more]
TM205_BOVIN1.120e-1537.82Transmembrane protein 205 OS=Bos taurus GN=TMEM205... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-086 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_A8 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417156 ID=CF417156; Name=CF417156; organism=Citrus sinensis; type=EST; length=695bp
CGCCCTTCCTGAAGCTGGCTCATCTCCTCTGCTTCTCCACTGCTTGGGGC
GCAGCTCTTTGGGTCACCTTCATCGGCGGCATCATCATGTTCAAGAACCT
ACCAAGGCATCAGTTTGGTAATCTACAAAGCAAGATGTTTCCAGCATATT
TTTCGCTAGTAGGAGTGTGCTGTTCAATAGCTGTTGCATCATTTGCATAT
CTGCATCCGTGGAAGTCATCATCCACTGCTGAAAAGTACCAGCTCGGCTT
CCTACTCTCTGCTTTTGCTTTCAATCTCACCAATTTGTTTGTCTTCACAC
CCATGACCATTGAGATGATGAAGCAAAGGCACAAAGTGGAGAGAGAAGAG
AACATTGGAGATGAAGTTGGGTGGACAAAGAACAGGGNAAGTTGCAAAGT
CTAACCCAAAGCTTGCAGCGATGAATAAGAAGTTTGGAATGATTCATGGA
TTATCATCCCTTGCTAATATCATGTCATTTGGCAGCCTTGCCATGCACTC
TTGGTATTTGGCTGGTAAGATCAATCTTTAACTTTATCAGAATTTCATCT
CCATATCCCTTCATTTGGATATTTGGGACGCTGGTTCACTTAATCATACA
TGATGCATTGACTTTGTACTCTGTATTGGGGAATGTGCAACTTATGTATA
ATTCACTATATCTTATGTATAATTCACTATATGTCATTATATGGA
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