CF417176

Overview
NameCF417176
Unique NameCF417176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1237..1710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 4.090e-39
Identity = 79/108 (73.15%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPAQWKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIV KPRSF
Sbjct:  397 VNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKPRSF 504          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.554e-38
Identity = 78/108 (72.22%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNP QWKK             +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  398 VNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.030e-38
Identity = 77/108 (71.30%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  398 VNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.030e-38
Identity = 77/108 (71.30%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WK              +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  398 VNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.030e-38
Identity = 77/108 (71.30%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WK+             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSK+DTAEKGGQFSLHILKHSTIVAKPRSF
Sbjct:  398 VNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.522e-38
Identity = 77/108 (71.30%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  399 VNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 4.522e-38
Identity = 76/108 (70.37%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WKK             S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHST+VAKPRSF
Sbjct:  398 VNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKPRSF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.007e-37
Identity = 76/108 (70.37%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWLANNPA WKK             + VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPR+F
Sbjct:  398 VNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF 505          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.244e-37
Identity = 75/106 (70.75%), Postives = 76/106 (71.70%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPR 320
            VNAWWLANNP QWKK             SKVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQ K+DT EKGGQFSLHILKHSTIVAKPR
Sbjct:  398 VNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CF417176 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.931e-37
Identity = 76/108 (70.37%), Postives = 77/108 (71.30%), Query Frame = 3
Query:    3 VNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 326
            VNAWWL NNPA WKK             S VEANGNDFRYLPFGVGRRSCP              RLVQN ELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  399 VNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
The following BLAST results are available for this feature:
BLAST of CF417176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_CICAR4.090e-3973.15Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_HELTU1.554e-3872.22Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_POPTM2.030e-3871.30Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI2.030e-3871.30Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_GLYEC2.030e-3871.30Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_SOYBN4.522e-3871.30Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU4.522e-3870.37Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA1.007e-3770.37Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_ZINEL2.244e-3770.75Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_MEDSA2.931e-3770.37Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-106 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_C7 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417176 ID=CF417176; Name=CF417176; organism=Citrus sinensis; type=EST; length=474bp
TAGTGAACGCGTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCT
GAAGAATTCAGGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGC
TAATGGAAATGACTTCCGTTACCTTCCTTTCGGTGTTGGAAGAAGAAGCT
GCCCTGGAATTATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGT
TTGGTACAGAACTTTGAGCTCTTGCCTCCTCCAGGTCAATCTAAGATTGA
CACTGCAGAGAAAGGTGGGCAGTTCAGTTTGCACATTTTGAAGCACTCGA
CCATTGTTGCCAAGCCTAGATCATTCTAGTTTCACAATTCCATTTGGTTG
TAATGTTAAGACTGTTTCAAAGTGGTTGAATGGTTTCTTCAATGTCGGAT
CAAATCAAGTGGCAGTTGGCTAGTTATGTAATACTTGTGTAAATTTGTGA
ACTTAAATCTTCAAATCTTCATTT
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