CF417195

Overview
NameCF417195
Unique NameCF417195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig442 contig Csv1_Contig442:1..545. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: SIR_SYNE7 (Sulfite reductase [ferredoxin] OS=Synechococcus elongatus (strain PCC 7942) GN=sir PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.367e-32
Identity = 51/84 (60.71%), Postives = 63/84 (75.00%), Query Frame = 1
Query:   25 VDPLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLG 276
            +D L   AMACP+LP C LAITE+ R +P +L RIR + E+ GL  +E  V+R+TGCPNGCARPYMAEL  VG  PN+YQ+WLG
Sbjct:  436 IDSLQRYAMACPALPTCGLAITESERALPGLLVRIRRLLEEQGLP-DEHFVVRMTGCPNGCARPYMAELAFVGSAPNTYQLWLG 518          

HSP 2 Score: 50.447 bits (119), Expect = 1.367e-32
Identity = 31/81 (38.27%), Postives = 45/81 (55.56%), Query Frame = 2
Query:  272 LGGTHNQTTLARTFMNXXXXXXXXXXXXXXXYYWKQKRQTKDESFGDFTNRMGFEKLQELVEKWEGPAKATARYNLKLFAD 514
            LGG+ +QT LAR F++                ++KQ RQ   ESFGDF +R+GF+ L++  E ++  A A  RY + L AD
Sbjct:  517 LGGSPDQTRLARPFIDRLADGDVETQLRPLFVFFKQSRQA-GESFGDFCDRVGFDALRQFSESYQHEA-AKPRYRVGLRAD 595          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: SIR_SYNY3 (Sulfite reductase [ferredoxin] OS=Synechocystis sp. (strain PCC 6803) GN=sir PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.499e-30
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 1
Query:   16 PRYVDPLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLG 276
            P  +D L   +MACP+LP C LA+TE+ R +P +  R+R +   + L  NES+V R+TGCPNGCARPYMAE+G VG  PNSYQ+WLG
Sbjct:  438 PEAIDTLVRYSMACPALPTCGLAVTESERIMPSVNARLRDLLNSLDLP-NESIVTRMTGCPNGCARPYMAEIGFVGSAPNSYQVWLG 523          

HSP 2 Score: 44.669 bits (104), Expect = 3.499e-30
Identity = 26/69 (37.68%), Postives = 34/69 (49.28%), Query Frame = 2
Query:  272 LGGTHNQTTLARTFMNXXXXXXXXXXXXXXXYYWKQKRQTKDESFGDFTNRMGFEKLQELVEKWEGPAK 478
            LGG+ NQ  LA  +                  Y+KQ R+ K ESFGDF +R+GF  L+E    +  PAK
Sbjct:  522 LGGSPNQERLAAAYTEKMPLEQLESLFEPLFVYFKQSRKGK-ESFGDFCHRVGFTALREFSHGYTAPAK 589          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_ACIF5 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=cysI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   31 PLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLG 276
            P+   AMAC +LP CPLA+ EA R +P  L RI A+  +VGL+  E++ +R+TGCPNGCARPY+AE+GLVG  P  Y ++LG
Sbjct:  419 PVRAHAMACVALPTCPLAMAEAERYLPVFLDRIEALLAEVGLE-GEALTVRMTGCPNGCARPYLAEIGLVGKAPGLYDLYLG 499          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_ACIF2 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=cysI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   31 PLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLG 276
            P+   AMAC +LP CPLA+ EA R +P  L RI A+  +VGL+  E++ +R+TGCPNGCARPY+AE+GLVG  P  Y ++LG
Sbjct:  419 PVRAHAMACVALPTCPLAMAEAERYLPVFLDRIEALLAEVGLE-GEALTVRMTGCPNGCARPYLAEIGLVGKAPGLYDLYLG 499          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_VIBPA (Sulfite reductase [NADPH] hemoprotein beta-component OS=Vibrio parahaemolyticus GN=cysI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.678e-19
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 1
Query:   46 AMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRNSQSNHTGK 306
            +MAC + P CPLA+ EA R +P  +  +  + EK GL  N+++++RVTGCPNGC R  +AE+GLVG  P  Y + LG N       K
Sbjct:  438 SMACVAFPTCPLAMAEAERFLPQFVTDVEGILEKHGLPENDNIILRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRAGTRVPK 524          

HSP 2 Score: 23.8682 bits (50), Expect = 5.678e-19
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  371 WKQKRQTKDESFGDFTNRMG 430
            W ++R+ + E+FGDFT R G
Sbjct:  546 WSKERE-EGEAFGDFTIRAG 564          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_THIRO (Sulfite reductase [NADPH] hemoprotein beta-component OS=Thiocapsa roseopersicina GN=cysI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.733e-19
Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 1
Query:   34 LNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRNSQ 288
            L +  M+C +LP CPLA+ EA R  PD L ++  +  K GL   E +V R+TGCPNGCARPY+AEL LVG GP  Y + LG N +
Sbjct:  416 LRLNGMSCVALPTCPLAMAEAERYYPDFLAQVERLTRKHGLAEQE-IVTRMTGCPNGCARPYLAELALVGKGPGRYNLMLGGNGR 499          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_ENT38 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Enterobacter sp. (strain 638) GN=cysI PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.603e-19
Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 1
Query:   25 VDPLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRN 282
            V P    +MAC S P CPLA+ EA R +P    ++ AV  K G+  +E +V+RVTGCPNGC R  +AELGLVG  P  Y + LG N
Sbjct:  424 VKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAVLAKHGIP-DEHIVMRVTGCPNGCGRALLAELGLVGKAPGRYNVHLGGN 508          

HSP 2 Score: 25.0238 bits (53), Expect = 9.603e-19
Identity = 15/53 (28.30%), Postives = 21/53 (39.62%), Query Frame = 2
Query:  272 LGGTHNQTTLARTFMNXXXXXXXXXXXXXXXYYWKQKRQTKDESFGDFTNRMG 430
            LGG  + T + R +                   W ++R+   E FGDFT R G
Sbjct:  505 LGGNRSGTRIPRMYRENITEPEILDSLDELVGRWAKEREA-GEGFGDFTVRAG 556          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_COLP3 (Sulfite reductase [NADPH] hemoprotein beta-component OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=cysI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.141e-18
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   43 TAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRNSQSNHTGK 306
            ++MAC + P CPLA+ EA R +P ++  + A+ EK GLK ++S+++RVTGCPNGC R  +AE+GLVG GP  Y ++LG +   +   K
Sbjct:  443 SSMACVAFPTCPLAMAEAERYLPGLVDDVEAILEKNGLK-DDSIILRVTGCPNGCGRAMLAEIGLVGKGPGKYNMYLGSDLAGSRVPK 529          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_SALAR (Sulfite reductase [NADPH] hemoprotein beta-component OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.624e-18
Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 1
Query:   25 VDPLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRN 282
            V P    +MAC S P CPLA+ EA R +P  + ++ AV  K G+  NE +V+RVTGCPNGC R  +AE+GLVG  P  Y + LG N
Sbjct:  424 VSPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEAVMAKHGVG-NEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGN 508          

HSP 2 Score: 22.7126 bits (47), Expect = 1.624e-18
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 2
Query:  371 WKQKRQTKDESFGDFTNRMG 430
            W ++R+   E FGDFT R G
Sbjct:  538 WAKEREA-GEGFGDFTVRAG 556          
BLAST of CF417195 vs. ExPASy Swiss-Prot
Match: CYSI_SALPK (Sulfite reductase [NADPH] hemoprotein beta-component OS=Salmonella paratyphi A (strain AKU_12601) GN=cysI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.624e-18
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
Query:   25 VDPLNITAMACPSLPLCPLAITEAXRGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGRN 282
            V P    +MAC S P CPLA+ EA R +P    ++ A+ EK G+  +E +V+RVTGCPNGC R  +AE+GLVG  P  Y + LG N
Sbjct:  424 VKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIP-DEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGN 508          

HSP 2 Score: 23.483 bits (49), Expect = 1.624e-18
Identity = 15/53 (28.30%), Postives = 20/53 (37.74%), Query Frame = 2
Query:  272 LGGTHNQTTLARTFMNXXXXXXXXXXXXXXXYYWKQKRQTKDESFGDFTNRMG 430
            LGG    T + R +                   W ++R+   E FGDFT R G
Sbjct:  505 LGGNRIGTRIPRMYKENITEPDILASLGELIGRWAKEREA-GEGFGDFTVRAG 556          
The following BLAST results are available for this feature:
BLAST of CF417195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
SIR_SYNE71.367e-3260.71Sulfite reductase [ferredoxin] OS=Synechococcus el... [more]
SIR_SYNY33.499e-3056.32Sulfite reductase [ferredoxin] OS=Synechocystis sp... [more]
CYSI_ACIF53.545e-2054.88Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ACIF23.545e-2054.88Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_VIBPA5.678e-1944.83Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_THIRO8.733e-1951.76Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_ENT389.603e-1950.00Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_COLP31.141e-1846.59Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SALAR1.624e-1850.00Sulfite reductase [NADPH] hemoprotein beta-compone... [more]
CYSI_SALPK1.624e-1848.84Sulfite reductase [NADPH] hemoprotein beta-compone... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-125 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E6 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417195 ID=CF417195; Name=CF417195; organism=Citrus sinensis; type=EST; length=546bp
GCTGGACTGCTGCTTCCCAGATATGTAGACCCGCTGAACATAACTGCAAT
GGCATGCCCTTCTTTACCACTCTGCCCTCTTGCTATAACTGAAGCTGANC
GTGGAATACCTGACATCCTTAAGCGGATTCGAGCTGTATTCGAGAAGGTT
GGTCTCAAGTACAATGAATCTGTAGTGATAAGGGTGACAGGCTGCCCTAA
TGGTTGTGCTAGGCCATATATGGCTGAACTCGGTCTGGTTGGTGATGGTC
CGAACAGTTATCAGATATGGCTTGGGAGGAACTCACAATCAAACCACACT
GGCAAGAACCTTTATGAATAAGGNTAAAGTTCNAGAATTAGAAAAAGTTT
TTGAACCCTTATTCTATTACTGGAAACAGAAACGACAAACCAAAGACGAA
TCATTTGGCGACTTCACAAACCGCATGGGATTTGAGAAACTTCAAGAGCT
GGTTGAAAAATGGGAAGGTCCTGCAAAAGCAACGGCAAGGTACAACCTGA
AACTTTTTGCCGATAAGGAGACATATGAAGCCGTGGATGAACTTGC
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