CF417278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.669e-22 Identity = 52/176 (29.55%), Postives = 91/176 (51.70%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVFEGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FNF K+ +E+LF+ + + + V INVSP+E+GH LL+P +C PQ + + + + +P FR+G+NSLG FA++NHLH YY+ IE +P K ++ + + EL+++P L + G +L+ + + L ++NI +N+ + Sbjct: 96 FNFNKINPKELLFELKRESERKCS---------------VIINVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVL---PNLNLYELVDFPSGFLFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFL 253 HSP 2 Score: 30.0314 bits (66), Expect = 1.669e-22 Identity = 11/28 (39.29%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 616 DTQVNPAVWEISGHMVLKRKKDYEEASE 699 ++ N A+ E++GH+ K ++DYE A+E Sbjct: 288 ESAFNVALCELAGHLPFKNRQDYESATE 315
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 65/179 (36.31%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FNF K+ EVLF+ + G P+ P + +V INVSP+E+GHVLL+P + LPQR+ + L + +P FR+G+NSLG A++NHLH YY+A P P+E AP+ + G I L P G +F G LE L + V A L + I +N+ + Sbjct: 124 FNFNKIRPGEVLFRMQREPKG-----PATP--KQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTPLDPKGC---IHLLQALPAPGFLFYTSGPGPDLEVLISRVCRATDYLSDREIAHNLFV 292
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FNF K+ EVLF+ P P + +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH YY+A P+E+AP++ + G + L + P G +F G LE L + V A L ++ I +N+ + Sbjct: 124 FNFNKIRPGEVLFRLHRE--------PDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQDLPAPGFLFYTRGPGTDLESLISRVCRATDYLTDHEIAHNLFV 291
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 60/179 (33.52%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FNF ++ EVLF+ +D V+ +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH YY+A P+E AP++ + G ++ L P G +F G LE L + V A L + I +N+ + Sbjct: 124 FNFNQIRPGEVLFRLHRKQD--------CSGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEPLDPRG---RLHVLQALPAPGFLFYTSRPGPDLEALISRVCRATDYLTDCEIAHNLFV 291
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 60/179 (33.52%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF---EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FNF K+ EVL++ P P + +V INVSP+E+GHVLL+P LPQR+ + + + +P FR+G+NSLG A++NHLH YY+A P+E+AP++ + G + L P G +F G LE L V A L ++ I +N+ + Sbjct: 124 FNFNKIQPGEVLYRLHRE--------PDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPL---DPGGHLHLLQGLPAPGFLFYTRGPGLDLESLICRVCRATDYLTDHEIAHNLFV 291
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASE-DGEVQFH----------------------PSAPIDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FN+ K+ EE++FQ SE + V H S ++ ++S ++V INVSP+E+GHVL +P CLPQ + + L + + +P FR+G+NSLG FA++NHLH +Y+ IE + +K + + + ++P G +F G L+ + + L NI +N+ + Sbjct: 111 FNYNKIKSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVINVSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFYLDHELLIESSCSKPLCPE---INFHLVTHFPAPGFLFYTDGKDLKSTAQKICKVTDFLVAKNIAHNLFV 307
BLAST of CF417278 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 57/200 (28.50%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 2 FNFTKVGQEEVLFQFEASEDGEV----QFHPSAP-------------------IDVENSPSVVAINVSPIEYGHVLLIPRVLECLPQRIDRDSFLLALYMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYMALPFPIEKAPTKKIISTGSGVKISELLNYPVRGLVF-EGGNSLEDLSNTVSDACICLQENNIPYNVLI 529 FN+ K+ EE++FQ SE + H S+ ++ + ++V INVSP+E+GHVL +P CLPQ + D L L + +P FR+G+NSLG FA++NHLH +Y+ IE + +K + + + ++P +F G +L+ + + L NI +N+ I Sbjct: 112 FNYNKIKPEEIVFQMIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINVSPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSSKPLCPE---MNFHLITHFPAPSFLFYTDGRNLKSTAQNICKVTDFLVAKNIAHNLFI 308 The following BLAST results are available for this feature:
BLAST of CF417278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417278 ID=CF417278; Name=CF417278; organism=Citrus sinensis; type=EST; length=699bpback to top |