CF417288

Overview
NameCF417288
Unique NameCF417288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.173e-25
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = -1
Query:  257 TQFSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIA 625
            +QFS   +      ++  G  F+ LK++Q    ED+EL KML RPGS+F  +L+KA KFS E YGSV R Y+ C ED   P EFQ W +++   D+V EIK  DHM MLS+P ++  CL  I+
Sbjct:  140 SQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLDIS 262          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  248 IDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE--LSKANKFSNEGYGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKY 610
            I++S  S   +  G +FL  K YQ SP ED+ L KML+RPG+ F+D+  +   +  +N  YGSV +VYV+ K D    +E Q WM+  +P  +V EI G DH  M SKP +L D L  IA+KY
Sbjct:  145 INNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKIANKY 267          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.240e-21
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = -1
Query:  248 IDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE--LSKANKFSNEGYGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKY 610
            I++S  S   +  G +FL  K YQ SP ED+ L KML+RPG+ F+D+  +   +  +N  YGSV +VYV+ K D    +E Q WM+  +P  +V EI G DH  M SKP +L D L  IA+KY
Sbjct:  145 INNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKIANKY 267          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  248 VIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE-LSKANKFSNEG-YGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKY 613
            V++++   R  +  G   L  KLY  SPPED+ L  ML+RPG+ ++D+ + K      EG YGSV RV++V  +D    +E Q W I  +P  EV E+ G DHM M SKP +L D L  IA KY
Sbjct:  139 VLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRIAAKY 262          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  248 VIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDE-LSKANKFSNEG-YGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKY 613
            V++++   R  +  G   L  KLY  SPPED+ L  ML+RPG+ ++D+ + K      EG YGSV RV++V  +D    +E Q W I  +P  EV E+ G DHM M SKP +L D L  IA KY
Sbjct:  139 VLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRIAAKY 262          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = -1
Query:  248 LFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKY 580
            L  G++ L   LY L  PE+ EL KML R GS+F + L+K   F+ EGYGS+ ++YV   +D     EFQ W I+N   D+V +++G DH   L+K +++ + L  +A  Y
Sbjct:  146 LKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256          
BLAST of CF417288 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14
Identity = 40/125 (32.00%), Postives = 69/125 (55.20%), Query Frame = -1
Query:  245 FSVIDSSNPSRKTLFFGYSFLTLKLYQLSPPEDVELGKMLLRPGSVFVDELSKANKFSNEGYGSVNRVYVVCKEDXCVPKEFQHWMIQNNPVDEVIEIKGVDHMPMLSKPEQLFDCLXXIAHKYA 619
            F+  + +  +  T+  G+  L   L+      + EL KM++R GS+F + L++  KF+ +GYGS+ +VY+   +D     +FQ W I N   D+V +++G DH   L+K E++   L  +A  YA
Sbjct:  134 FTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTKTEEVAHILQEVADAYA 258          
The following BLAST results are available for this feature:
BLAST of CF417288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PNAE_RAUSE2.173e-2545.53Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7B_ORYSJ4.240e-2143.90Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI4.240e-2143.90Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PIR7A_ORYSJ1.044e-1942.74Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI1.044e-1942.74Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_HEVBR8.275e-1739.64Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES1.726e-1432.00Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-218 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417288 ID=CF417288; Name=CF417288; organism=Citrus sinensis; type=EST; length=625bp
GAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTAAATAAAATACCAT
ATTTATTTTATTAATTANAAAAATTATTTATTACAATTAAATAAACACAT
ATGCTTTTAAAAAGCATATTTTCTCAATAATATCTTTATTGTAAATAAAA
AAGCATGGCAATGCTTGTCATGGTTATGCCACGTAAGTTGCTAATTCAAT
TACAAACTGTTGNGGGCATATCATTATTGTTTAGTAATAAATTAAGCATA
CTTATGAGCAATGNGANANAGACAGTCAAAAAGTTGTTCGGGCTTGGAAA
GCATCGGCATATGATCTACACCCTTTATCTCTATCACCTCATCAACAGGA
TTGTTTTGGATCATCCAATGCTGAAATTCCTTAGGAACACAAANATCCTC
CTTGCATACCACATANACTCGGTTTACGGACCCATATCCTTCATTACTGA
ACTTATTTGCCTTGGATAATTCATCAACAAATACTGATCCAGGCCTCAAT
AACATCTTTCCCAGCTCCACGTCCTCAGGAGGACTAAGCTGATACAGCTT
GAGAGTCAAGAAGCTGTAACCGAAAAATAATGTCTTGCGAGAAGGATTTG
ATGAGTCAATCACTGAAAATTGAGT
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