CF417289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EIF3D_ARATH (Eukaryotic translation initiation factor 3 subunit D OS=Arabidopsis thaliana GN=TIF3D1 PE=1 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.710e-80 Identity = 142/158 (89.87%), Postives = 154/158 (97.47%), Query Frame = 1 Query: 1 VARCEVQSVVDVNNQRSFLTLNALNEFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDY 474 VARCE+QSV D+NNQRSFLTLNALNEFD KYSGVDWRQKLETQRGAVLATELKNN NKLAKWTAQ+LLA+AD+MK+G+VSRVHPRDHFNHVIL+V+GYKPKDFA QINL+T+NMWGIVKSIVDLCMKL+EGKYVLVKDPSKPQVRIYEVPPDAFENDY Sbjct: 393 VARCELQSVADLNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNGNKLAKWTAQALLANADMMKIGFVSRVHPRDHFNHVILSVLGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPPDAFENDY 550
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROER (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila erecta GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.196e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + F+T+ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEAQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROSI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila simulans GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + F+T+ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROSE (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila sechellia GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + F+T+ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROME (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila melanogaster GN=eIF-3p66 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + F+T+ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROYA (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila yakuba GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49 Identity = 92/159 (57.86%), Postives = 124/159 (77.99%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + F+T+ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGDSQFMTIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROVI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila virilis GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + FL++ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFLSIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROMO (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila mojavensis GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + FL++ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFLSIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROGR (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila grimshawi GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + FL++ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 379 VARCEHDGVLQTPSGEPQFLSIKALNEWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
BLAST of CF417289 vs. ExPASy Swiss-Prot
Match: EI3D1_DROWI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila willistoni GN=eIF-3p66 PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49 Identity = 91/159 (57.23%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 VARCEVQSVVDV-NNQRSFLTLNALNEFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 471 VARCE V+ + + F+++ ALNE+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH HVIL +KP +FATQINLS N WGI++ I+DL MK +GKY+++KDP+KP +R+Y++P + F++D Sbjct: 377 VARCEHDGVLQTPSGEPQFMSIKALNEWDSKMANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQRDGKYLIMKDPNKPIIRLYDIPDNTFDSD 535 The following BLAST results are available for this feature:
BLAST of CF417289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417289 ID=CF417289; Name=CF417289; organism=Citrus sinensis; type=EST; length=698bpback to top |