CF417290

Overview
NameCF417290
Unique NameCF417290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12367 contig Csv1_Contig12367:21..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG2_ARATH (Probable isoaspartyl peptidase/L-asparaginase 2 OS=Arabidopsis thaliana GN=At3g16150 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.457e-65
Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 3
Query:   57 MGKWAIAVHGGAGVDPNLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGC*VV 467
            MG WAIAVHGGAG+DPNLP +RQE AKQLLTRCLNLGI ALRSN  AIDVVELV+RELETDPLFNSGRGSALTE GTVEMEASIMDG KRRCGAVSG+TTVKNPISLARLVM+KSPHSYLAFSGAE+FAR+QG  +V
Sbjct:    1 MGGWAIAVHGGAGIDPNLPAERQEEAKQLLTRCLNLGIIALRSNVSAIDVVELVIRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGITTVKNPISLARLVMDKSPHSYLAFSGAEDFARKQGVEIV 137          

HSP 2 Score: 32.3426 bits (72), Expect = 1.457e-65
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  584 AGAAATDSPLQMNGL 628
            AGAAATDSP+QMNGL
Sbjct:  172 AGAAATDSPIQMNGL 186          

HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  427 GPRNSPDSRGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPNGG 567
            G  +    +GVE+ DNEYF+T++NVGMLKLAKEANSILFDYRIP  G
Sbjct:  124 GAEDFARKQGVEIVDNEYFVTDDNVGMLKLAKEANSILFDYRIPPMG 170          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG1_ARATH (Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidopsis thaliana GN=At5g08100 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 6.110e-48
Identity = 89/131 (67.94%), Postives = 101/131 (77.10%), Query Frame = 3
Query:   66 WAIAVHGGAGVDP-NLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            WAIA+HGGAG  P +LP +R+   +  L  CL+LGISAL+S  P +DV ELVVRELE  P FN+G+GS LT  GTVEMEASIMDG  +RCGAVSGLTTV NPISLARLVMEK+PH YLAF  AE FAR  G
Sbjct:    4 WAIALHGGAGDIPIDLPDERRIPRESALRHCLDLGISALKSGKPPLDVAELVVRELENHPDFNAGKGSVLTAQGTVEMEASIMDGKTKRCGAVSGLTTVVNPISLARLVMEKTPHIYLAFDAAEAFARAHG 134          

HSP 2 Score: 42.3578 bits (98), Expect = 6.110e-48
Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 1
Query:  448 SRGVELFDNEYFITEENVGMLKLAKEANSILFDYRIPN 561
            + GVE  D+ +FIT EN+  LK AKE N +  DY +P+
Sbjct:  132 AHGVETVDSSHFITPENIARLKQAKEFNRVQLDYTVPS 169          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAN (Isoaspartyl peptidase/L-asparaginase OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41
Identity = 85/134 (63.43%), Postives = 106/134 (79.10%), Query Frame = 3
Query:   57 MGKWAIAVHGGAGVDP-NLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            MG W+IA+HGGAG  P +LP +R++  ++ L  CL +G+ AL+S  P +DVVELVVRELE    FN+G GS LT +GTVEMEASIMDG   +CGAVSGL+TV NPISLARLVM+K+PH YLAF GA++FA+QQG
Sbjct:    1 MGGWSIALHGGAGDIPFSLPPERRQPREEGLRHCLQIGVEALKSQKPPLDVVELVVRELENIQHFNAGIGSVLTNSGTVEMEASIMDGKTMKCGAVSGLSTVLNPISLARLVMDKTPHIYLAFQGAQDFAKQQG 134          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG_LUPLU (Isoaspartyl peptidase/L-asparaginase OS=Lupinus luteus PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.084e-40
Identity = 84/134 (62.69%), Postives = 106/134 (79.10%), Query Frame = 3
Query:   57 MGKWAIAVHGGAGVDP-NLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            MG W+IA+HGGAG  P +LP +R++  ++ L  CL +G+ AL++  P +DVVELVVRELE    FN+G GS LT +GTVEMEASIMDG   +CGAVSGL+TV NPISLARLVM+K+PH YLAF GA++FA+QQG
Sbjct:    1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGSVLTNSGTVEMEASIMDGNTMKCGAVSGLSTVLNPISLARLVMDKTPHIYLAFQGAQDFAKQQG 134          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAL (Isoaspartyl peptidase/L-asparaginase OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.731e-38
Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 3
Query:   57 MGKWAIAVHGGAGVDP-NLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            MG W+IA+HGGAG  P +LP +R++  ++ L  CL +GI AL++  P +DVVELVVRELE    FN+G GS LT +GTVEMEASIMDG   +CGAVSGL TV NPISLAR VM+K+PH +LAF GA++  +QQG
Sbjct:    1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGIEALKAQNPPLDVVELVVRELENIQHFNAGIGSVLTNSGTVEMEASIMDGNTMKCGAVSGLNTVMNPISLARQVMDKTPHIFLAFQGAQDLGKQQG 134          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASPG_LUPAR (Isoaspartyl peptidase/L-asparaginase (Fragment) OS=Lupinus arboreus PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.161e-34
Identity = 72/115 (62.61%), Postives = 91/115 (79.13%), Query Frame = 3
Query:  111 PVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            P +R++  ++ L  CL +G+ AL++    +DVVELVVRELE +  FN+G GS LT +GTVEMEASIMDG   +CGAVSGL+TV NPISLARLVMEK+PH YLAF GA++FA+QQG
Sbjct:    1 PPERRKPREEGLRHCLQIGVEALKARKSPLDVVELVVRELENNEHFNAGIGSVLTNSGTVEMEASIMDGKSMKCGAVSGLSTVLNPISLARLVMEKTPHMYLAFQGAQDFAKQQG 115          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASGL1_MOUSE (L-asparaginase OS=Mus musculus GN=Asrgl1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.170e-24
Identity = 58/128 (45.31%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   72 IAVHGGAGVDPNLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            + VHGG     N+   R+E  ++ + R    G   L++   A+D VE  V  LE DP FN+G GS L  NG +EM+ASIMDG     GAVS +  + NP+ LARLVMEK+PH +L   GAE+FA   G
Sbjct:   22 VVVHGGGA--SNISANRKELVREGIARAATEGYKILKAGGSAVDAVEGAVTVLENDPEFNAGYGSVLNVNGDIEMDASIMDGKDLSAGAVSAVRCIANPVKLARLVMEKTPHCFLTGHGAEKFAEDMG 147          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASGL1_HUMAN (L-asparaginase OS=Homo sapiens GN=ASRGL1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.573e-23
Identity = 62/128 (48.44%), Postives = 75/128 (58.59%), Query Frame = 3
Query:   72 IAVHGGAGVDPNLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            + VHGG G  P +   R+E   Q + R   +G   LR    A+D VE  V  LE DP FN+G GS L  NG VEM+ASIMDG     GAVS +  + NPI LARLVMEK+PH +L   GA +FA   G
Sbjct:    5 VVVHGG-GAGP-ISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLNTNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMG 130          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASGL1_BOVIN (L-asparaginase OS=Bos taurus GN=ASRGL1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.573e-23
Identity = 59/128 (46.09%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   72 IAVHGGAGVDPNLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            + VHGG     N+   R+E  +Q + R   +G + L+    A+D VE  V  LE DP FN+G GS L ENG VEM+ASIM+G     GAVS +  + NPI LARLVM+K+PH +L   GA  FA   G
Sbjct:    5 VVVHGGGA--SNISKDRKERVRQGILRAATVGYNILKQGGSAVDAVEGAVTVLEDDPDFNAGCGSVLNENGEVEMDASIMNGKDLSAGAVSAVRCIANPIKLARLVMDKTPHCFLTDQGAARFAAANG 130          
BLAST of CF417290 vs. ExPASy Swiss-Prot
Match: ASGL1_RAT (L-asparaginase OS=Rattus norvegicus GN=Asrgl1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.020e-22
Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   72 IAVHGGAGVDPNLPVQRQEAAKQLLTRCLNLGISALRSNCPAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQG 455
            + VHGG     N+   R+E   + + +    G + L++   A+D VE  V  LE DP FN+G GS L  +G +EM+ASIMDG     GAVS +  + NP+ LARLVMEK+PH +L   GAE+FA   G
Sbjct:   28 VVVHGGGA--SNISPGRKELVSEGIAKAATEGYNILKAGGSAVDAVEGAVTMLENDPEFNAGYGSVLNADGDIEMDASIMDGKDLSAGAVSAVRCIANPVKLARLVMEKTPHCFLTGRGAEKFAADMG 153          
The following BLAST results are available for this feature:
BLAST of CF417290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ASPG2_ARATH1.457e-6586.86Probable isoaspartyl peptidase/L-asparaginase 2 OS... [more]
ASPG1_ARATH6.110e-4867.94Isoaspartyl peptidase/L-asparaginase 1 OS=Arabidop... [more]
ASPG_LUPAN2.854e-4163.43Isoaspartyl peptidase/L-asparaginase OS=Lupinus an... [more]
ASPG_LUPLU1.084e-4062.69Isoaspartyl peptidase/L-asparaginase OS=Lupinus lu... [more]
ASPG_LUPAL1.731e-3860.45Isoaspartyl peptidase/L-asparaginase OS=Lupinus al... [more]
ASPG_LUPAR1.161e-3462.61Isoaspartyl peptidase/L-asparaginase (Fragment) OS... [more]
ASGL1_MOUSE3.170e-2445.31L-asparaginase OS=Mus musculus GN=Asrgl1 PE=1 SV=1[more]
ASGL1_HUMAN1.573e-2348.44L-asparaginase OS=Homo sapiens GN=ASRGL1 PE=1 SV=2[more]
ASGL1_BOVIN1.573e-2346.09L-asparaginase OS=Bos taurus GN=ASRGL1 PE=2 SV=1[more]
ASGL1_RAT1.020e-2243.75L-asparaginase OS=Rattus norvegicus GN=Asrgl1 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-220 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417290 ID=CF417290; Name=CF417290; organism=Citrus sinensis; type=EST; length=629bp
GGCCAGAGCGAGGGGGCGAGAGCGCGTGAGCAGTAAGCAAAAACAACCGA
AAGAAAATGGGAAAATGGGCTATAGCGGTGCATGGTGGCGCTGGCGTGGA
CCCCAATCTTCCCGTGCAACGACAAGAGGCCGCCAAACAACTCCTCACTC
GCTGCCTTAATCTTGGCATCTCCGCTCTTCGCTCTAACTGCCCTGCTATC
GACGTCGTCGAACTCGTTGTGAGAGAACTGGAAACGGATCCTCTGTTCAA
CTCTGGCCGTGGATCTGCACTTACGGAGAATGGAACGGTGGAGATGGAGG
CGAGCATTATGGACGGGCCCAAGAGACGCTGCGGCGCCGTATCTGGGCTT
ACCACCGTTAAAAACCCTATATCTCTTGCGCGACTCGTCATGGAGAAATC
TCCCCATTCATATCTCGCCTTCTCTGGGGCCGAGGAATTCGCCAGACAGC
AGGGGTGTTGAGTTGTTCGACAATGAATACTTCATCACCGAAGAGAACGT
GGGAATGTTAAAATTAGCCAAGGAAGCAAACTCNATCCTGTTTGATTACA
GAATTCCNAACGGGGGNATTCGAAACCTGCAGCGCTGGAGCTGCAGCCAC
AGACAGCCCCTTGCAAATGAACGGACTTC
back to top