CF417295

Overview
NameCF417295
Unique NameCF417295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12515 contig Csv1_Contig12515:220..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.426e-74
Identity = 139/204 (68.14%), Postives = 152/204 (74.51%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWPNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNESAFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQRVLP+MIDVGT NE LLKDPLYLGLQ+HRLDG+EY+ VIDEFMEA+FTRWP+VIVQFEDFQSKWAFKLLQRYR  YRMFNDD                      MIDFPK KI                RKTMARMLGN E AF+SARSQFWVVDAKGLITE REN+DPDA+PFA K+ EI RQGL EGA+L EVV++VKP
Sbjct:  228 NPQRVLPVMIDVGTDNENLLKDPLYLGLQDHRLDGEEYIEVIDEFMEAVFTRWPHVIVQFEDFQSKWAFKLLQRYRNNYRMFNDDIQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAARKTMARMLGNTEIAFESARSQFWVVDAKGLITEARENVDPDARPFARKIKEIERQGLSEGATLAEVVREVKP 431          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 8.928e-69
Identity = 133/204 (65.20%), Postives = 148/204 (72.55%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWPNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNESAFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQRVLP+MIDVGT NE LLK+PLYLGLQ+ RLDG+EY++V+DEFMEA+FTRWPNVIVQFED Q+KWA  LLQRYR+KYR FN D                      MIDFPKQKI                RKTMARMLGN+ESAFD ARSQFWVVD KGLITE R N+DP+ +PFA K NEIS QGL EGA LVEVV+QVKP
Sbjct:  225 NPQRVLPVMIDVGTNNEDLLKNPLYLGLQKKRLDGEEYLAVMDEFMEAVFTRWPNVIVQFEDIQNKWALTLLQRYRHKYRTFNVDVQGTSGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSSGVGVLNAARKTMARMLGNDESAFDRARSQFWVVDDKGLITEKRANLDPEVQPFAWKENEISLQGLNEGAKLVEVVRQVKP 428          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.311e-47
Identity = 97/204 (47.55%), Postives = 127/204 (62.25%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWPNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNESAFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQRVLP+M+DVGT N+KLL+DPLYLGL++ RL+G+EY+S++DEF+EA+  RWP  +VQFEDFQ+KWAF+ L RYR K+ MFNDD                      + DF  QKI                 + ++RM G       SA   F+++D  GLIT+DR++IDP A PFA   +EI   GL EGA L EVV++VKP
Sbjct:  211 NPQRVLPVMLDVGTNNQKLLEDPLYLGLRQPRLEGEEYLSIVDEFVEAVHARWPKAVVQFEDFQAKWAFETLDRYRKKFCMFNDDIQGTAGVALAGLLGTVRAQGRPLTDFANQKIVVVGAGSAGLGVLKMALQAVSRMTG------PSADPHFFLLDKNGLITKDRKDIDPAALPFAKAHHEIEGLGLQEGAGLAEVVKKVKP 408          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 71/206 (34.47%), Postives = 109/206 (52.91%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRW-PNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNES-AFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQ+ LPI +DVGT NE+LLKDPLY+GL+  R+ G EY + +DEFMEA  +++  N ++QFEDF ++ AF+LL +YR KY  FNDD                     + +   K K+                   +  M    E  + ++AR + W+VD+KGLI + R ++  + + FA +  E+         +L  +VQ++KP
Sbjct:  184 NPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDD--------IQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKEGLSKENARKKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMK--------NLEAIVQKIKP 373          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.350e-24
Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRW-PNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNES-AFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQ+ LPI +DVGT NE+LLKDPLY+GL+  R+ G EY + +DEFMEA  +++  N ++QFEDF +  AF+LL +YR KY  FNDD                     + +   K K+                   +  M    E  + + AR + W+VD+KGLI + R ++  + + FA +  E+         +L  +VQ++KP
Sbjct:  184 NPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDD--------IQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLIVMAMEKEGLSKEKARQKIWLVDSKGLIVKGRASLTEEKEVFAHEHEEMK--------NLEAIVQKIKP 373          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWP-NVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNES-AFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQ+ LP+++DVGT NE+LL+DPLY+GL+  R+ G+EY  ++DEFM+A+  ++  N ++QFEDF +  AF+LL +YR KY MFNDD                     + +   K ++                   +  M    E      A  + W+VD+KGLI + R +++ + + FA    E++        SL EVV+ VKP
Sbjct:  219 NPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDD--------IQGTASVAVAGILAALRITKNRLSNHVFVFQGADEAAMGIAHLLVMALEKEGIPKTEAIKKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVN--------SLEEVVRLVKP 408          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24
Identity = 69/205 (33.66%), Postives = 103/205 (50.24%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWPNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNESAFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISR-QGLWEGASLVEVVQQVKP 614
            +P   LPI +DVGT N  LL+DP+Y+G +  R+ G+EY   I+ FMEA+  RWP+V++QFEDF  K A  +L+RY+ +Y  FNDD                      + D   Q+I                   +A+M+    S  D ARSQ ++VD  GL+ ++  N+ P  +  A K++ I+      +  SL+ VV   KP
Sbjct:  183 SPAYTLPITLDVGTDNPHLLEDPMYMGWRHPRIGGEEYSEFIEAFMEAVHRRWPDVLIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACQAAGTKLSD---QRI---TFLGAGSAGCGIAEAIVAQMVSEGISD-DQARSQVFMVDRWGLLLDNMPNLLPFQQKLAQKIDNINHWDDFSDNVSLLNVVNNAKP 380          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 6.698e-24
Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRWP-NVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNESAFDS-ARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQ+ LP+++DVGT NE+LL+DPLY+GL+  R+ G  Y  ++DEFM+A+  ++  N ++QFEDF +  AF+LL +YR KY MFNDD                     + +   K K+                   +  M    E    + A  + W+VD+KGLI + R +++ + + FA    E++        SL EVV+ VKP
Sbjct:  219 NPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDD--------IQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVN--------SLEEVVRLVKP 408          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.748e-24
Identity = 68/206 (33.01%), Postives = 106/206 (51.46%), Query Frame = 3
Query:    3 NPQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRW-PNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNES-AFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            NPQ  LP+++DVGT NE+LLKDPLY+GL++ R+ G EY   +DEFMEA+ +++  N ++QFEDF +  AF+LL +YR +Y  FNDD                     + +   K K+                   +  M    E    + A  + W+VD+KGLI + R ++  + + FA +  E+         +L  +VQ++KP
Sbjct:  184 NPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDD--------IQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMK--------NLEAIVQEIKP 373          
BLAST of CF417295 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.949e-23
Identity = 67/205 (32.68%), Postives = 105/205 (51.22%), Query Frame = 3
Query:    6 PQRVLPIMIDVGTTNEKLLKDPLYLGLQEHRLDGDEYVSVIDEFMEAIFTRW-PNVIVQFEDFQSKWAFKLLQRYRYKYRMFNDDXXXXXXXXXXXXXXXXXXXXXSMIDFPKQKIXXXXXXXXXXXXXXXXRKTMARMLGNNES-AFDSARSQFWVVDAKGLITEDRENIDPDAKPFAXKVNEISRQGLWEGASLVEVVQQVKP 614
            P + LP+M+DVGT NE LLKDPLY+GL+  R+ G  Y  ++DEFMEA+ +R+  N ++QFEDF +  AF+LL +YR KY  FNDD                     + +   K ++                   +  M    E  + + A  + W+VD+KGLI + R ++ P+ + FA +  E+         +L ++V+ +KP
Sbjct:  174 PHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDD--------IQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMK--------NLEDIVKDIKP 362          
The following BLAST results are available for this feature:
BLAST of CF417295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOM_SOLTU2.426e-7468.14NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOM_AMAHP8.928e-6965.20NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAON_SOLTU4.311e-4747.55NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAOX_MOUSE2.719e-2534.47NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_RAT1.350e-2434.47NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAON_MOUSE3.007e-2433.98NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAO1_SHEAM5.129e-2433.66NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAON_HUMAN6.698e-2433.98NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOX_HUMAN8.748e-2433.01NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOX_COLLI1.949e-2332.68NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-225 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417295 ID=CF417295; Name=CF417295; organism=Citrus sinensis; type=EST; length=614bp
TAAATCCACAAAGGGTACTTCCTATCATGATCGACGTTGGAACTACTAAT
GAGAAGCTCCTGAAAGACCCTTTGTATTTGGGGTTGCAAGAACACCGTCT
TGATGGTGATGAGTATGTCTCAGTCATTGATGAATTTATGGAAGCAATAT
TTACCCGTTGGCCCAATGTGATTGTGCAGTTTGAAGATTTCCAGAGTAAG
TGGGCATTCAAGCTGTTACAGCGTTATAGATACAAGTACAGAATGTTTAA
CGATGATGTCCAGGGTACAGCAGGGGTTGCAGTAGCTGGTCTTTTAGGAG
CGGTGAGGGCACAAGGGAGGTCAATGATTGACTTTCCAAAGCAAAAAATT
GTTGTTGCTGGGGCTGGAAGTGCAGGATTGGGTGTTCTCAACGCTGCAAG
GAAGACAATGGCAAGGATGTTAGGAAATAATGAATCTGCTTTTGATAGTG
CACGGAGTCAATTCTGGGTAGTTGATGCCAAGGGCCTTATAACTGAGGAC
CGTGAAAACATTGATCCAGATGCAAAGCCTTTTGCTANGAAGGTCAACGA
AATCAGTCGCCAAGGACTATGGGAAGGCGCTAGTCTTGTTGAAGTGGTAC
AGCAAGTGAAACCT
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