CF417302

Overview
NameCF417302
Unique NameCF417302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8442 contig Csv1_Contig8442:150..779. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF7_ARATH (6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 3.988e-81
Identity = 138/167 (82.63%), Postives = 152/167 (91.02%), Query Frame = 2
Query:  152 SNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGGHD 652
            S+  +++ KIV GP GY+L+DVPHL DY+PDLPTYPNPLQDNPAYSVVKQYFVH DD+VP+KVVVHKD PRG HFRRAGPRQKVYFESDEV+ACIVTCGGLCPGLNTVIRE+V SL YMYGVKR+LGIDGGYRGFYAKNTI L  K VNDIHKRGGT++GTSRGGHD
Sbjct:    2 SSPRSNKPKIVNGPGGYILQDVPHLIDYLPDLPTYPNPLQDNPAYSVVKQYFVHADDSVPEKVVVHKDGPRGVHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREVVSSLSYMYGVKRILGIDGGYRGFYAKNTIPLNSKVVNDIHKRGGTIIGTSRGGHD 168          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF3_ARATH (6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 4.409e-80
Identity = 138/163 (84.66%), Postives = 149/163 (91.41%), Query Frame = 2
Query:  164 NSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGGHD 652
            +S+ KI+ G  GYVLEDVPHLSDY+P LPTYPNPLQDNPAYSVVKQYFV  DD+VPQK+VVHKD PRG HFRRAGPRQKVYFESDEV+ACIVTCGGLCPGLNTVIREIV SL YMYGVKR+LGIDGGYRGFYAKNT++L  K VNDIHKRGGT+LGTSRGGHD
Sbjct:    6 SSKPKIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSVPQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHD 168          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF1_ARATH (6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.568e-77
Identity = 137/168 (81.55%), Postives = 148/168 (88.10%), Query Frame = 2
Query:  149 ASNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGGHD 652
            +S+  NS RKIVTGPAGY+LEDVPH SD  PD PTYPNPLQDN AYSVVKQYFV  DDTVPQK+VVH DSPRGTHFRRAGPRQ+VYFESD+V ACIVTCGGLCPGLNTVIREIV  L YMYGVKR+LGIDGGYRGFYA+NTI L  K VNDIH+ GGT+LGTSRGGH+
Sbjct:    2 SSSVPNSDRKIVTGPAGYILEDVPHFSDDFPDHPTYPNPLQDNAAYSVVKQYFVDEDDTVPQKIVVHPDSPRGTHFRRAGPRQRVYFESDDVLACIVTCGGLCPGLNTVIREIVCGLSYMYGVKRILGIDGGYRGFYARNTIHLDLKTVNDIHRSGGTILGTSRGGHN 169          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF6_ARATH (6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.468e-75
Identity = 132/168 (78.57%), Postives = 148/168 (88.10%), Query Frame = 2
Query:  149 ASNNGNSQRKIVTGPAGYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGGHD 652
            ASN  + Q K+V GPAGYVLEDVPHLSDYI DLPTYPNPLQ N AYSVV+QYFV  DDTV +K+VVHKDSPRGTHFRRAGPRQKVYF+  +V ACIVTCGGLCPGLNTVIREIV  L++MYGV  V+G+D G+RGFY+KNT+ALTPK V+DIHKRGGT+LGTSRGGHD
Sbjct:    2 ASNGVDEQIKLVEGPAGYVLEDVPHLSDYILDLPTYPNPLQSNAAYSVVRQYFVDEDDTVQEKIVVHKDSPRGTHFRRAGPRQKVYFKPSDVRACIVTCGGLCPGLNTVIREIVCGLHFMYGVTEVIGVDCGFRGFYSKNTVALTPKTVSDIHKRGGTILGTSRGGHD 169          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF4_ARATH (6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.584e-61
Identity = 108/152 (71.05%), Postives = 127/152 (83.55%), Query Frame = 2
Query:  197 GYVLEDVPHLSDYIPDLPTYPNPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGGHD 652
            G+VLEDVPHL+ ++PDLP+YPNPL+++ AY++VK+ FV  +D V Q +VV K S RG HFRRAGPR++VYF SDEV ACIVTCGGLCPG+NTVIREIV  L  MYGV  +LGI GGYRGFY+KNT+ LTPK VNDIHKRGGT L TSRGGHD
Sbjct:   68 GFVLEDVPHLTKFLPDLPSYPNPLKESQAYAIVKRTFVSSEDVVAQNIVVQKGSKRGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGINTVIREIVCGLNNMYGVNNILGIQGGYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGGHD 219          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF2_ARATH (6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.432e-31
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 2
Query:  260 NPLQDNPAYSVVKQYFVHVDDTVPQKVVVHKD--SPRGTHFRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKNTIALTPKGVNDIHKRGGTVLGTSRGG 646
            NPL+DNP +     +++   D +  +V       S     + RAGPR+++ +E   V A IVTCGGLCPG+NTVIRE+V  L+ +YGV+ + GI  GYRGFY+   + L PK V+D HK+GGTVL TSRGG
Sbjct:   21 NPLEDNPYFHPSNGFYITPSDVILAQVAYDHSAHSQSRVAYHRAGPRREIMYEPSAVKAAIVTCGGLCPGMNTVIRELVVGLWELYGVREIYGIPAGYRGFYSMKAVKLDPKAVHDWHKKGGTVLATSRGG 151          
BLAST of CF417302 vs. ExPASy Swiss-Prot
Match: K6PF5_ARATH (6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.212e-22
Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  215 VPHLSDYIPDLPTYPNPL---QDNPAYSVVKQY--------FVHVDDTVPQKVVVHKDSPRGTH--------------FRRAGPRQKVYFESDEVYACIVTCGGLCPGLNTVIREIVYSLYYMYGVKRVLGIDGGYRGFYAKN--TIALTPKGVNDIHKRGGTVLGTSRGG 646
            +PH++D +PD     +       +P    V  Y        +++ +D V  KV+ +  SP                    RAGPR+K+YF  +EV A I+TCGGLCPGLN VIR IV +L  +YGVK ++GI  GYRGF  K+   + L+ K V +IH  GG++LG SRGG
Sbjct:   87 IPHITDVLPDAEAIRSTFCLKMRSPTEDFVGGYPSDEEWHGYINNNDRVLLKVISYS-SPTSAGAECLDHDCSWVEQWIHRAGPREKIYFRPEEVKAAIITCGGLCPGLNDVIRHIVITL-EIYGVKNIVGIPFGYRGFSDKDLTEMPLSRKVVQNIHLSGGSLLGVSRGG 255          
The following BLAST results are available for this feature:
BLAST of CF417302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
K6PF7_ARATH3.988e-8182.636-phosphofructokinase 7 OS=Arabidopsis thaliana GN... [more]
K6PF3_ARATH4.409e-8084.666-phosphofructokinase 3 OS=Arabidopsis thaliana GN... [more]
K6PF1_ARATH1.568e-7781.556-phosphofructokinase 1 OS=Arabidopsis thaliana GN... [more]
K6PF6_ARATH1.468e-7578.576-phosphofructokinase 6 OS=Arabidopsis thaliana GN... [more]
K6PF4_ARATH4.584e-6171.056-phosphofructokinase 4, chloroplastic OS=Arabidop... [more]
K6PF2_ARATH8.432e-3148.096-phosphofructokinase 2 OS=Arabidopsis thaliana GN... [more]
K6PF5_ARATH3.212e-2239.186-phosphofructokinase 5, chloroplastic OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-232 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-003_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417302 ID=CF417302; Name=CF417302; organism=Citrus sinensis; type=EST; length=652bp
TTCTTCTTTGAAATCGCGTTTCTTGCAAAAGCCTTCCCAGAACTCGAAGC
AGTTGTCATCTTCGGTCAGTTTTAGTTCAAGTTCGAGTTCGAGTTCGAGT
TCGTGTTCCGATTTTCGATCTCCGACAAAAGCTATTTCGATGGCGGCGGC
ATCCAACAATGGAAACTCACAACGAAAGATTGTGACTGGTCCTGCTGGTT
ATGTTCTTGAAGATGTTCCTCATTTGTCTGATTATATCCCCGATCTTCCT
ACATATCCGAATCCGCTGCAAGACAATCCTGCATATTCTGTTGTTAAGCA
ATATTTTGTTCATGTGGATGACACGGTACCACAAAAGGTTGTTGTTCATA
AGGATAGTCCAAGAGGGACTCACTTCCGAAGAGCTGGACCTCGTCAAAAG
GTGTATTTTGAGTCAGATGAAGTTTATGCTTGTATCGTGACATGTGGTGG
CTTATGCCCTGGACTCAACACGGTGATTAGAGAGATAGTTTACAGTCTTT
ACTACATGTATGGAGTGAAGAGAGTGCTGGGAATTGATGGAGGATACAGG
GGCTTTTATGCTAAAAATACAATTGCTCTAACACCTAAGGGTGTGAATGA
CATCCATAAACGTGGTGGAACCGTCCTTGGTACTTCACGAGGTGGCCATG
AT
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