CF417329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_BOVIN (Maspardin OS=Bos taurus GN=SPG21 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29 Identity = 74/166 (44.58%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 G D+ F+S VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N+F DT F W W PSF+LK+ VL Sbjct: 2 GEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRNIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIF--NQTWTASSFWLMPSFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_RAT (Maspardin OS=Rattus norvegicus GN=Spg21 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 G D+ F+S VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N F DT F W W P+F+LK+ VL Sbjct: 2 GEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFQQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNAFSDTSIF--NQTWTANSFWLMPAFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_MOUSE (Maspardin OS=Mus musculus GN=Spg21 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 G D+ F+S VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N F DT F W W P+F+LK+ VL Sbjct: 2 GEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFQQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNAFSDTSIF--NQTWTANSFWLMPAFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_PONAB (Maspardin OS=Pongo abelii GN=SPG21 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 G D+ F+ VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N+F DT F W W P+F+LK+ VL Sbjct: 2 GEIKVSPDYNWFRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIF--NQTWTANSFWLMPAFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_HUMAN (Maspardin OS=Homo sapiens GN=SPG21 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 G D+ F+ VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N+F DT F W W P+F+LK+ VL Sbjct: 2 GEIKVSPDYNWFRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIF--NQTWTANSFWLMPAFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_MACFA (Maspardin OS=Macaca fascicularis GN=SPG21 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28 Identity = 71/159 (44.65%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 193 DFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 D+ F+ VPL KI + +K W YD GP+ + PLI LP +GTA+V+++QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV SL+L N+F DT F W W P+F+LK+ VL Sbjct: 9 DYNWFRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIF--NQTWTANSFWLMPAFMLKKIVL 165
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_XENLA (Maspardin OS=Xenopus laevis GN=spg21 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28 Identity = 73/169 (43.20%), Postives = 103/169 (60.95%), Query Frame = 1 Query: 172 GVFSAPGDFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVLTGN 657 G D+ F+S VPL +I + +K W YD GP+ V P+I LP +GTA+V++ QI+AL+ GYRVI++ P W+H E+ F K LD + + +HL+G SLGGFLAQ FA+ H+ RV+SL+L N+F DT F W W P+F+LK+ +L GN Sbjct: 2 GAIKISPDYNWFRSTVPLKRIIVDDDDSKVWSLYDAGPRSVRCPIIYLPPVSGTADVFFHQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDDLHLDKVHLFGASLGGFLAQKFAEYTHKSPRVQSLILCNSFSDTSIF--NQTWTANSFWLMPAFMLKK-ILLGN 167
BLAST of CF417329 vs. ExPASy Swiss-Prot
Match: SPG21_DANRE (Maspardin OS=Danio rerio GN=spg21 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 73/159 (45.91%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 193 DFVHFKSQVPLYKIPIG---TKQWRYYDFGPKVVP-PLICLPGTAGTAEVYYKQIMALSMKGYRVISVDIPRVWNHHEWIQAFEKFLDAIDVHHIHLYGTSLGGFLAQLFAQ--HRPRRVRSLVLSNTFLDTHSFAAAMPWAPIVSW-TPSFLLKRYVL 648 D+ F+S VPL +I + +K W YD GPK + P+I LP +GTAEV+++Q++ALS GYRVIS+ P W+ E+ F K LD + + +HL+G SLGGFLAQ FA+ ++ RV SLVL N+F DT F W W PSF+LK+ VL Sbjct: 9 DYNWFRSTVPLKRIIVDDDDSKVWSLYDAGPKSIRCPIIFLPPVSGTAEVFFQQVLALSGWGYRVISLQYPVYWDLLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEVTYKSPRVHSLVLCNSFSDTSIF--NQTWTANSFWLMPSFMLKKIVL 165 The following BLAST results are available for this feature:
BLAST of CF417329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417329 ID=CF417329; Name=CF417329; organism=Citrus sinensis; type=EST; length=707bpback to top |