CF417340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DHP1_CAEBR (Dihydropyrimidinase 1 OS=Caenorhabditis briggsae GN=dhp-1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25 Identity = 53/103 (51.46%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM---RPFNYLFH 313 YV +TS A+IFN+YP+KG I VGSDADI+IFNPN++ I+A +HH LD N++EG + G E+TI+ GR+VW N +L VPGSGK++ + PF + H Sbjct: 371 YVSITSATAAKIFNIYPKKGRIAVGSDADIVIFNPNATRTISAETHHHNLDFNIFEGIKCHGVAEITISRGRIVWANGQLQTVPGSGKFVPLLANSPFVFSSH 473
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DHP1_CAEEL (Dihydropyrimidinase 1 OS=Caenorhabditis elegans GN=dhp-1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.208e-24 Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEM---RPFNYLFH 313 YV +TS+ A+IFN+YPRKG I VGSDADI+IFNPN++ I+ +HH LD N++EG G EVTI+ GR+VW + +L VPGSGK+I + PF + H Sbjct: 371 YVSITSSTAAKIFNIYPRKGRIAVGSDADIVIFNPNATRTISKDTHHHNLDFNIFEGINCHGVAEVTISRGRIVWAHGKLQTVPGSGKFIPLLANSPFVFSTH 473
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYS_DICDI (Dihydropyrimidinase OS=Dictyostelium discoideum GN=pyd2 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23 Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDKAD 331 +VR TS+E ARIFN+YPRKG I VG D DI+I++PN S I+ +HH +D N++EG +V G TI G +VW +++L+ V GSG+++ PF +F G+++ D Sbjct: 373 FVRATSSEAARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGPVFDGIEQRD 478
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: HYDA_PSEAE (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22 Identity = 45/108 (41.67%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 2 SVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPFNYLFHGLDK 325 S+ ++V LTST A+IFN++PRKGAI VG+DAD+++++P S ++A +HH R+D N++EGR V+G TI+ G+++W +L PG+G+Y+E + ++ L + Sbjct: 360 SMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGSRTLSAATHHQRVDFNIFEGRTVRGIPSHTISQGKLLWAAGDLRAEPGAGRYVERPAYPSVYEVLGR 467
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DHP2_CAEEL (Dihydropyrimidinase 2 OS=Caenorhabditis elegans GN=dhp-2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21 Identity = 47/94 (50.00%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 295 +V +TST A+IFN YP+KG I VGSDADI+I+N N++ I+ +HH +D N++EG +V G E+TI+ GR VW N +L V GSG++I + P Sbjct: 367 FVAVTSTMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISKDTHHHAIDFNIFEGMQVHGVPEITISRGRTVWANGQLKTVQGSGQFIPLAP 460
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYS_MOUSE (Dihydropyrimidinase OS=Mus musculus GN=Dpys PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.204e-21 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKADAKYLSSLQAPVKR 370 +V +TST A+IFN+YP+KG I VGSDADI+I++P ++ I+A++HH ++ N++EG G VTI+ GRVV+E NV G GK+I +PF Y++ + + D + PVKR Sbjct: 374 FVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRRISAKTHHQAVNFNIFEGMVCHGVPLVTISRGRVVYEAGVFNVTAGHGKFIPRQPFAEYIYKRIKQRDQ---TCTPVPVKR 490
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DHP2_CAEBR (Dihydropyrimidinase 2 OS=Caenorhabditis briggsae GN=dhp-2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.103e-21 Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRP 295 +V +TST A+IFN YPRKG I VGSDADI+++N N++ I+ +HH +D N++EG +V G E TI GR+VW + +L V G+G+++ + P Sbjct: 367 FVAVTSTMAAKIFNCYPRKGRIAVGSDADIVVWNANATRTISKDTHHHAIDFNIFEGMQVHGVPETTICRGRIVWADGQLRTVQGAGRFVPLPP 460
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_PONAB (Dihydropyrimidinase-related protein 2 OS=Pongo abelii GN=DPYSL2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20 Identity = 45/95 (47.37%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A++FN+YPRKG I VGSDAD++I++P+S I+A++H+S L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_HUMAN (Dihydropyrimidinase-related protein 2 OS=Homo sapiens GN=DPYSL2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20 Identity = 45/95 (47.37%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A++FN+YPRKG I VGSDAD++I++P+S I+A++H+S L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_BOVIN (Dihydropyrimidinase-related protein 2 OS=Bos taurus GN=DPYSL2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20 Identity = 45/95 (47.37%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A++FN+YPRKG I VGSDAD++I++P+S I+A++H+S L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPF 474 The following BLAST results are available for this feature:
BLAST of CF417340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417340 ID=CF417340; Name=CF417340; organism=Citrus sinensis; type=EST; length=664bpback to top |