CF417364

Overview
NameCF417364
Unique NameCF417364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417364 vs. ExPASy Swiss-Prot
Match: PHT21_ARATH (Inorganic phosphate transporter 2-1, chloroplastic OS=Arabidopsis thaliana GN=PHT2-1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 47/93 (50.54%), Postives = 51/93 (54.84%), Query Frame = 1 
Query:  400 DEPAKTEAGDDELPGMAQAFHXXXXXXXXXXXXXXXXXXXXPFFMKSLGQGLDIKTKLLSHATLLFGFYMAWNIGSX*CSQCHGGLQXGSGAL 678
            D     EA  D   GMAQAFH                    P FMKSLGQGL +KTKLLS+ATLLFGFYMAWNIG+   +    G   GSGAL
Sbjct:  100 DGKGNAEATGD-FSGMAQAFHISSTTARAISIVIAFSALTLPIFMKSLGQGLALKTKLLSYATLLFGFYMAWNIGANDVANAM-GTSVGSGAL 190
The following BLAST results are available for this feature:
BLAST of CF417364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PHT21_ARATH8.534e-1450.54Inorganic phosphate transporter 2-1, chloroplastic... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-294 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417364 ID=CF417364; Name=CF417364; organism=Citrus sinensis; type=EST; length=722bp
CCACCACCACCTACTTCTCTTTCTTCTTGTTGTTGAGCACAATGAGCTGT
TGCACATTCCATGGCCAAGAATCCATCTGAATAATTCCTTTAGATACTCT
TCTTTCTCTTTTCCCCACCCTCTCTATCTTATCACTCCCTCCAAAATATG
CCTCCCCCTTTTTGCTCATCTTCTTCAAGAAATACTGTTTCACCAGAAGC
ATTTCTTTTTCATAAACATCGTTCTTCCTCCTCAGCTCTTCTTCTCAAGC
CAAATTTATCTCTACCCAGATCATCTTATTCTCTCCTGAGCCTCAAGAAC
TCAAGACTCACGCATAGTTTTGCTAGTATATCATCTTTTGCTGAAGCTGA
AGGTGAAGAAGAACAAAATGAAGGACTCCAAGTTCAGGAACATCATCATG
ATGAACCTGCAAAGACTGAAGCTGGTGATGACGAATTGCCTGGAATGGCA
CAAGCCTTTCATATATCTTCAAGTACGGCCTCTGCTATTTCGATATGCAT
AGCCTTGGCTGCTCTTACTCTTCCTTTCTTTATGAAGTCTTTGGGTCAAG
GACTGGATATAAAGACCAAGCTTTTATCACATGCAACACTTTTATTTGGT
TTTTACATGGCTTGGAATATTGGNAGCCNATGATGTAGCCAATGCCATGG
GGGACTTCAGNGGGGATCAGGTGCTTTGNACACTGCGACAAGCTGTTTTG
ACTGCGGCTGTACTGGAGTTTT
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