CF417373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX_SOLLC (Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.709e-38 Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 31 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 M+L KA+E VS N V VFSKT CPFCVSVK+L +LG TFKA+ELD E DGS+IQ+ALAEWTGQ+TVPNVFIG KHIGGCD+TTALHRE Sbjct: 1 MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAEWTGQRTVPNVFIGRKHIGGCDATTALHRE 89 HSP 2 Score: 33.113 bits (74), Expect = 7.709e-38 Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 296 KGKLVPLLTEAGAVAKTA 349 +GKL+PLLTEAGA+AKT+ Sbjct: 89 EGKLLPLLTEAGAIAKTS 106
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX_VERFO (Glutaredoxin OS=Vernicia fordii PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.221e-37 Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 31 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 MA+ KAQE VSSNSVVVFSKT CP+C SVK+L QLG FK IELD ESDGSD+Q+ALAEWTGQ+TVPNVFIGGKHIGGCD TT +H+E Sbjct: 1 MAMIKAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAEWTGQRTVPNVFIGGKHIGGCDKTTGMHQE 89 HSP 2 Score: 28.4906 bits (62), Expect = 2.221e-37 Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 2 Query: 296 KGKLVPLLTEAGAV 337 +GKL+PLLTEAGAV Sbjct: 89 EGKLIPLLTEAGAV 102
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.086e-36 Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 31 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 MAL KA+ETV+S VVV+SK+ CPFCV VK+LF+QLG TFKAIELD ESDGS++QSALAEWTGQ+TVPNVFI GKHIGGCD T AL+ E Sbjct: 1 MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNNE 89 HSP 2 Score: 32.3426 bits (72), Expect = 1.086e-36 Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 281 LHCTGKGKLVPLLTEAGAVAKTA 349 L +GKLVPLLTEAGA+A +A Sbjct: 84 LALNNEGKLVPLLTEAGAIASSA 106
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GRXC2_ARATH (Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.919e-36 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 31 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 MA+ KA+E V+S SVVVFSKT CP+CV VKEL QQLG FKA+ELD ESDGS IQS LAEWTGQ+TVPNVFIGG HIGGCD+T+ LH++ Sbjct: 1 MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNHIGGCDATSNLHKD 89 HSP 2 Score: 30.4166 bits (67), Expect = 6.919e-36 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 299 GKLVPLLTEAGAVA-KTA 349 GKLVPLLTEAGA+A KTA Sbjct: 90 GKLVPLLTEAGAIAGKTA 107
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX_RICCO (Glutaredoxin OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.476e-35 Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 31 MALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 MA+ K +E VSSN+VVVFSKT CP+C SVK+L QLG +K +ELD ESDGS+IQ+ALAEWTGQ+TVPNVFIGGKHIGGCDSTTA H + Sbjct: 1 MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRTVPNVFIGGKHIGGCDSTTAKHSQ 89 HSP 2 Score: 27.335 bits (59), Expect = 7.476e-35 Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 2 Query: 296 KGKLVPLLTEAGAV 337 +G+LVPLLTEAGAV Sbjct: 89 QGQLVPLLTEAGAV 102
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GRXC4_ORYSJ (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.862e-31 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 4 RIKDKEDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHR 294 ++++ MAL KA+E V+S+ VVVFSKT CPFC VK L +L ++KA+ELD ESDGS++QSALA+WTGQ+TVP VFI GKHIGGCD T A+H+ Sbjct: 18 QLEEPSKPVMALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALADWTGQRTVPCVFIKGKHIGGCDDTMAMHK 114 HSP 2 Score: 27.7202 bits (60), Expect = 5.862e-31 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 299 GKLVPLLTEAGAVA 340 G LVPLLTEAGA+A Sbjct: 116 GNLVPLLTEAGAIA 129
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GRXC1_ARATH (Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.711e-26 Identity = 56/94 (59.57%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 16 KEDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 KE+ E+ + KA+E VS+ VVVFSKT C +C VK+L QLG TFK +ELD+ SDG +IQSAL+EWTGQ TVPNVFI G HIGGCD +++ Sbjct: 12 KEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQ 105
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX_DICDI (Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.216e-20 Identity = 43/87 (49.43%), Postives = 64/87 (73.56%), Query Frame = 1 Query: 37 LPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 + K + + ++ +++FSKT CP+C+SVK+LF++L V +ELD ESDGS++QSA + +G +TVP VFI K IGGCD+TT LH + Sbjct: 1 MDKVKALIKAHKLIIFSKTTCPYCISVKDLFKKLKVVPFVVELDLESDGSELQSAAGQISGVRTVPQVFINEKFIGGCDATTKLHSQ 87 HSP 2 Score: 23.0978 bits (48), Expect = 1.216e-20 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 296 KGKLVPLLTEAG 331 +GKL+PLL EAG Sbjct: 87 QGKLIPLLQEAG 98
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX2_MOUSE (Glutaredoxin-2, mitochondrial OS=Mus musculus GN=Glrx2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18 Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 19 EDTEMALPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 + T + + QET+S+N VV+FSKT C +C K++F + V +KA+ELD G+ Q AL + TG++TVP +F+ G+ IGG T LH+E Sbjct: 44 KSTTTPVNQIQETISNNCVVIFSKTSCSYCSMAKKIFHDMNVNYKAVELDMLEYGNQFQDALHKMTGERTVPRIFVNGRFIGGAADTHRLHKE 136
BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GLRX2_BOVIN (Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17 Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 49 QETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRE 297 QET+S+N VV+FSKT C +C K LF + V +K +ELD GS Q AL + TG++TVP +F+ G IGG T LH+E Sbjct: 55 QETISNNCVVIFSKTSCSYCTMAKNLFHDMNVNYKVVELDMLEYGSQFQDALHKMTGERTVPRIFVNGTFIGGATDTHRLHKE 137 The following BLAST results are available for this feature:
BLAST of CF417373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417373 ID=CF417373; Name=CF417373; organism=Citrus sinensis; type=EST; length=561bpback to top |