CF417375

Overview
NameCF417375
Unique NameCF417375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.957e-61
Identity = 124/206 (60.19%), Postives = 145/206 (70.39%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKSXS 617
            LPLD  AP+LCAGI+ YSPLR  GLDKP               AVKFAKAMGVKVTVISTSP K+++A++ LGAD+FL S D D+MQ+A+ T+DGIIDTV+  H               V+VG P+K LELPV PLL G K V G  +GGMKETQ+M++FAA HNITADIE I ID  NTA+ERL K DVRYRFVID+GNTLK  S
Sbjct:  154 LPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLKVRS 359          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.913e-59
Identity = 118/203 (58.13%), Postives = 141/203 (69.46%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLK 608
            LPLDA AP+LCAGI+VYSP++ HGLDKP                VKFAKAMG KVTVISTS  K+ +AI RLGAD FL S DP +++ A+ T+DGIIDTV+  H               V+VG P+K LELPV PL+F  K V+G  +GG+KETQ+M++ A +HNITADIE IS D  NTA+ERLEK DVRYRFVIDV NTLK
Sbjct:  152 LPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLK 354          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.927e-58
Identity = 118/204 (57.84%), Postives = 141/204 (69.12%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKS 611
            LPLD+ AP+LCAGI+ YSPLR HGLDKP               AVK AKA G  VTVISTS SKK++A+E+LGAD FL S D D+MQ+A  TL GIIDTV+  H               V+VG P+K LELPV PLL G K + G  +GG+KETQ+ML+FAA+HNITAD+E I +D  NTA+ERL K DVRYRFVIDV NT+K+
Sbjct:  133 LPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 6.699e-58
Identity = 116/203 (57.14%), Postives = 140/203 (68.97%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGP-DKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLK 608
            LPLD  AP+LCAG++VYSP++ HGLDKP               AVKFAKAMG KVTVISTS  K+ +A+ RLGAD FL S DP +M+ A+ T+DGIIDTV+  H               V+VG P + LELPV PL+FG K VVG  VGG+KETQ+M++ A +HNITADIE IS D  NTA+ERL K DV+YRFVIDV NT+K
Sbjct:  152 LPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMK 354          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.650e-56
Identity = 114/204 (55.88%), Postives = 143/204 (70.10%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKS 611
            + LDA AP+LCAG++VYSPL+   LDKP               AVKF KA G KVTVISTSP+KK +A+ RLGAD+F+ S +P++MQSA+ TLDGIIDTV+  H               ++VG PDK LELPV PLL G K + G  +GGMKETQ+M++FAA+H+I +DIE + +D  NTA+ERL KGDVRYRFVIDV NTLK+
Sbjct:  157 MALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.888e-52
Identity = 109/202 (53.96%), Postives = 138/202 (68.32%), Query Frame = 3
Query:    6 PLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLK 608
            PLDA AP+LCAGI+ YSPL+  GLDKP               AVKFAKA G KVTVISTS SKK++A++ LG D F+ S DP +MQ+AV TLDGIIDTV+  H               ++VG PDK L+LPV PL+ G + + G  +GG+KETQ+M++FAA++NI AD+E I ID  NTA++RL K DV+YRFVIDV  +LK
Sbjct:  157 PLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.726e-51
Identity = 108/204 (52.94%), Postives = 138/204 (67.65%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKS 611
            LPLD+ AP+LCAGI+ YSPL+ +GLDKP               AVK AKA G +VTVI  S SK+K+A+E+LGAD+FL + D ++M+ A S+LDGIIDTV   H               V+VG P+K  ELPV  LL G K + G   GG+KETQ+ML+FAA+HNITAD+E I +D  NTA+ERL K DVRYRFVID+ NT+++
Sbjct:  156 LPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51
Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKS 611
            LPLDA AP+LCAGI+VYSP++ +G+ +P               A+KF KA G+KVTVISTSP+K+ +AI++LGAD+FL S DP++M++A+ T+D IIDT++  H               V VG P K LEL V PL+ G K + G  +GGMKETQ+ML+F  +HNITADIE I +   NTA+ERL K DV+YRFVIDV N+  S
Sbjct:  155 LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.141e-50
Identity = 102/204 (50.00%), Postives = 137/204 (67.16%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTLKS 611
            LPLDA AP+LCAGI+VYSP++ +G+ +P               A+KF KA G+KVTVIS+SP+K+ +AI+ LGAD+FL S DP++M++A  T+D IIDT++  H               V VG P K L+LP+ PL+ G K + G   GG+KETQ+ML+F  +HNI A+IE I +D  NTA+ERL K DV+YRFVIDV N+L S
Sbjct:  148 LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSS 351          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.552e-49
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 3
Query:    6 PLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTL 605
            PLD  AP+LCAG++VY P+R  GLD+P               AVKF KA GVKVTVISTSP K+ +A+ERLGAD FL S + ++M++A  T+DGIIDTV+  H               V VG P K ++L + PL    K+V G  +GGM++TQ+M++FA EH + A++E I +++ N A+ERL+KGDVRYRFVIDV NT+
Sbjct:  158 PLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTM 358          
The following BLAST results are available for this feature:
BLAST of CF417375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
MTDH_FRAAN4.957e-6160.19Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH8_ARATH7.913e-5958.13Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_PETCR3.927e-5857.84Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH6.699e-5857.14Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_MESCR1.650e-5655.88Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
GEDH1_OCIBA1.888e-5253.96Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_APIGR2.726e-5152.94Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
MTDH_MEDSA4.650e-5151.47Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH1_STYHU5.141e-5050.00Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH9_ORYSJ2.552e-4949.25Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-305 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417375 ID=CF417375; Name=CF417375; organism=Citrus sinensis; type=EST; length=684bp
GCCTTCCTCTTGATGCCTGTGCCCCAATGCTTTGTGCTGGTATCTCAGTT
TACAGCCCTTTGAGATCACATGGACTTGACAAACCAGGTATGCATGTCGG
TGTAGTTGGCCTGGGTGGATTAGGCCATATGGCTGTCAAGTTTGCTAAAG
CAATGGGGGTTAAGGTAACAGTCATTAGTACCTCCCCTAGTAAGAAGAAG
GATGCCATTGAACGTCTCGGTGCTGACACATTTCTGTTTAGTCATGATCC
GGATGAGATGCAGTCTGCCGTGAGCACCTTGGACGGTATCATTGACACAG
TAACCGGCTTTCACCCTCTATTGCCATTACTTGGACTATTGAAATATAAT
GGCAAGCTTGTTATTGTCGGTGGACCAGATAAGCTAGAGCTACCGGTTCC
TCCTCTACTCTTTGGGGCAAAGGCTGTTGTTGGCTGTTTCGTTGGGGGCA
TGAAGGAGACTCAAGACATGCTCAATTTTGCAGCCGAACACAACATAACG
GCAGACATCGAGACTATATCAATCGATAATGCGAACACTGCCCTGGAGCG
TCTTGAGAAAGGCGATGTCAGATATCGATTTGTCATCGACGTTGGGAACA
CACTGAAGTCTANCTCTTAGATATTTGGCTGGATCGGCTATACTATATGA
TGAAATGTTGAGTCATATATAATTAGTATCCTAT
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