CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_PARUW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=kdsB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26 Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERN 434 + P I+ V+AL P ST VT L E+A + + VKCV+D G A+YFSR LIP NK+ Y HLG+ Y +F+ Y L TPLQLEEDLEQLKVLE+GY++KV VD GVD PED+ K+E ++ ++N Sbjct: 113 LNPLTINLAVQALVNDPQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALYFSRALIPSNKTNSFKNGAIYFRHLGLYVYRPSFIINYQKLPSTPLQLEEDLEQLKVLEHGYRIKVAIVDQANIGVDTPEDIHKVEEWLCKQN 256
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_SOLUE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=kdsB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 425 LI+P ID V L PD + T ++ P + DPN VK V D+ G AIYFSR IP+++ + PY H+G+ Y +FL Y L PL+ E LEQL+ LENGY+++V++ ++E+ GVD PED+E++ + Sbjct: 103 LIDPAAIDAAVLPLVHEPDVLMGTLKKRIEDPREIVDPNVVKVVTDHAGDAIYFSRCPIPFDRDRSADT--PYFKHVGLYVYQRDFLLSYSTLPVGPLERSERLEQLRALENGYRIRVVETEYESLGVDTPEDLERVSRLFK 242
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_FUSNN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=kdsB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERNL 437 LIE E+I+ +++ + D +T L E+ +PN VK V D + YAIYFSR +IPY + N Y H+GI Y +F+ Y + TPL+ E LEQL+VLENGYK+KV++ H GVD E++E++ ++++E N+ Sbjct: 101 LIEYEMINSLIETFKENKDLKMATLKHKLLNKEEIKNPNNVKVVCDKNDYAIYFSRSVIPYPRK---NGNISYFKHIGIYGYKRDFVIEYSKMLATPLEEIESLEQLRVLENGYKIKVLETTHSLIGVDTQENLEQVINYIKENNI 243
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VARPS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Variovorax paradoxus (strain S110) GN=kdsB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-------HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDAPEDVEKIES 416 LI+P +ID V AL A P+A STA + D F +PN VK V+D G A+YFSR IP+ + G N P +L H+GI Y + F++ +P L P P++ E LEQL+ L +G+++ + V H A GVD P D+E++ + Sbjct: 103 LIDPALIDAVASALAAHPEAAMSTAAHEIDSLDDFLNPNVVKAVLDAQGNALYFSRAPIPWWRDGSANGAPPSVLPAPAPLRHIGIYGYRAGFVRSFPSLAPAPVEATEALEQLRALWHGHRI-AVHVSHVAPGPGVDTPADLERVRA 249
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DICNV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=kdsB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIES 416 L+ P++I V + L A +T T ++ PN VK V D GYA+YFSR ++PY + P YL H+GI +Y LK YP L PTPL+ E LEQL+ LE+G+K+ V ++D GVD+PED+ ++++ Sbjct: 104 LLPPDLITTVARTLIEHTQASVATLATVCDAPES--PNTVKVVCDCAGYALYFSRSVMPYVRDAAA-PPVSYLRHIGIYAYRVQLLKRYPQLAPTPLEQAEKLEQLRFLEHGFKIAVAQIDEAPPAGVDSPEDLARVQA 239
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_THEYD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=kdsB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.222e-20 Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIE 413 LI+ E+ID ++ ++ D++ + A K +D F+PN VK V D +GYA+YFSR IP+++ G F Y H+GI Y+ LK + GL + L+ E LEQL+ LENG K+KV ++++ G+D PED+E E Sbjct: 109 LIKKEMIDQLIDLMKNENDSIGTLAKRIEKEDDFFNPNIVKVVFDKNGYALYFSRSPIPFDREKFIKGFSKNNFMYK-HIGIYGYNVRILKNFVGLPMSRLEEIESLEQLRALENGIKIKVGLTEYDSFGIDTPEDLEVAE 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOUR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=kdsB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.222e-20 Identity = 59/146 (40.41%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 410 LIEP +ID +K L + T T +K D PN VK V D GYA+YFSR +P N K N + H+G+ Y +FL + + PT L++ E LEQL+VLENGY++KV++ D+E+ GVD P D+EK+ Sbjct: 101 LIEPAMIDEAIKPLAEDSSVMMGTLKTRIKTLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFASRKLLCYKHVGLYVYRRDFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDYESIGVDTPGDLEKV 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_PELCD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKS-----GKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 425 LI+P +I+ V L P T T L + DPN VK V D G+A+YFSR IP+ + V+P L H+G+ Y +FL + GL +PL+ E LEQL+ LENGY ++V++ D + GVD PED+ ++E+ +R Sbjct: 101 LIDPHMIEAAVAPLSEDPAIPMGTLKTPLLNWQEYRDPNVVKVVTDRRGFALYFSRAPIPHPRELAVDDSAVSPASMGLFRHIGLYVYRKDFLLTFAGLPESPLERLEKLEQLRALENGYAIRVVETDRVSLGVDTPEDLVRVEAHLR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sp. (strain M21) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 54/152 (35.53%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 LI+P +ID ++ L P +T +K D PN VK V D G +YFSR +P+ + V+ + H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD P D++K+ +++R Sbjct: 101 LIDPAMIDEAIRPLLDDPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKLLCYKHVGLYVYRREFLPVFAGLKPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTPADLDKVLERLKDR 252
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHRVO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chromobacterium violaceum GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 57/143 (39.86%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKI 410 LI+PE+I+ + + L A V + A D F+PN VK +D HG A+YFSR IPY + + P H+G+ Y + FL Y GL P PL+ E LEQL+VL +GY + V D A GVD PED+E++ Sbjct: 104 LIQPELINRLAELLAGADAPVATLAHALHDAADHFNPNVVKVALDKHGRALYFSRAPIPYARDAYAADRSALPAGLPVYRHIGMYGYRAGFLAAYAGLEPGPLEQYEALEQLRVLWHGYGIAVALADEAPAAGVDTPEDLERV 246 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |