CF417468

Overview
NameCF417468
Unique NameCF417468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8778 contig Csv1_Contig8778:1025..1593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF417468 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSJ (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. japonica GN=SAPK2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 2 
Query:    2 FLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMXXXXXXXXXXXXXIETSGDFVCAL 247
            FLKNLPIE  +E + S+Q  D N  SQ +EEI+ IIQEARKPG+G KF GQ    GSM             +E SGDFVCAL
Sbjct:  260 FLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQEARKPGDGSKFSGQIPGLGSM--ELDDVDTDDIDVEDSGDFVCAL 339
[Close]
BLAST of CF417468 vs. ExPASy Swiss-Prot
Match: SAPK2_ORYSI (Serine/threonine-protein kinase SAPK2 OS=Oryza sativa subsp. indica GN=SAPK2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 2 
Query:    2 FLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKFGGQCLIGGSMXXXXXXXXXXXXXIETSGDFVCAL 247
            FLKNLPIE  +E + S+Q  D N  SQ +EEI+ IIQEARKPG+G KF GQ    GSM             +E SGDFVCAL
Sbjct:  260 FLKNLPIEMTDEYQMSVQMNDINTPSQGLEEIMAIIQEARKPGDGSKFSGQIPGLGSM--ELDDIDTDDIDVEDSGDFVCAL 339
[Close]
BLAST of CF417468 vs. ExPASy Swiss-Prot
Match: SAPK1_ORYSJ (Serine/threonine-protein kinase SAPK1 OS=Oryza sativa subsp. japonica GN=SAPK1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.026e-12
Identity = 44/84 (52.38%), Postives = 50/84 (59.52%), Query Frame = 2 
Query:    2 FLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGPKF--GGQCLIGGSMXXXXXXXXXXXXXIETSGDFVCAL 247
            FLKNLPIE  +E + SMQ  D N  SQS+EE++ IIQEARKPG+  K    GQ    GSM             IE SGDFVCAL
Sbjct:  260 FLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSM-DLDDIDDIDDIDIENSGDFVCAL 342
[Close]
BLAST of CF417468 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 2 
Query:    2 FLKNLPIEFMEEDEGSMQKGDENDQSQSIEEILGIIQEARKPGEGP-KFGGQCLIGGSMXXXXXXXXXXXXXIETSGDFVCAL 247
            FLK LP+E  +E + SMQ  D N  SQS+EE + IIQEA+KPG+      GQ    GSM             +E+SGDFVC L
Sbjct:  250 FLKRLPVEMTDEYQRSMQLADMNTPSQSLEEAMAIIQEAQKPGDNALGVAGQVACLGSMDLDDIDFDIDDIDVESSGDFVCPL 332
The following BLAST results are available for this feature:
BLAST of CF417468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SAPK2_ORYSJ5.441e-1453.66Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK2_ORYSI5.441e-1453.66Serine/threonine-protein kinase SAPK2 OS=Oryza sat... [more]
SAPK1_ORYSJ1.026e-1252.38Serine/threonine-protein kinase SAPK1 OS=Oryza sat... [more]
AAIP_WHEAT5.630e-1145.78Abscisic acid-inducible protein kinase (Fragment) ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-398 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417468 ID=CF417468; Name=CF417468; organism=Citrus sinensis; type=EST; length=569bp
GTTCTTAAAGAATTTGCCAATAGAATTCATGGAAGAAGATGAAGGGAGCA
TGCAAAAAGGTGATGAAAATGACCAATCTCAGAGTATTGAAGAAATATTA
GGCATCATTCAGGAGGCACGAAAACCAGGGGAGGGTCCCAAATTTGGTGG
GCAATGCTTAATAGGAGGAAGTATGGATCTCGATGATTTGGATACAGATG
CAGATACAGATGATATTGAGACAAGCGGCGATTTTGTCTGTGCATTATGA
GATTTGAGTGCCAACTTCAAATCATTTCATCTTGCCAATTGCTCGCTACT
CAATTCTGGATAAGGTGGCTGTCTCCTCATGTCTTGGGAATCAAATAATT
TGTGTTTAGATTTAATGAGTGATGTTGATTTTCTGATGTGTAACAGTGTA
AGCTTCTCTTCTAAAGAGTGCTTCATTGTATATTTAGTTCATAGTTTTGT
AATAGGTAAAACTTTTAATTGTCTCATAATTAAGTTAGTGGATGTTTGTA
CATTTTAAAATAAAAATTTGGCCACTTATTTAACCAAATATGAGGATGAA
CATCCAAATTTTTTTTTTC
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