CF417500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.247e-75 Identity = 100/140 (71.43%), Postives = 111/140 (79.29%), Query Frame = 3 Query: 105 LKKKKRXXXXXXXXXXXXXXXXXXXXXTRKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEG 524 LKK+KR RKLI+ R +QY+KEY E++KELI LKREAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYG+PNLKSV+ELIY G Sbjct: 13 LKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRG 152 HSP 2 Score: 75.8702 bits (185), Expect = 1.247e-75 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEIL 636 +RGYGKLN QRIALTDNSI+EQALG+HGIIC EDLIHEIL Sbjct: 150 KRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEIL 189 HSP 3 Score: 53.5286 bits (127), Expect = 1.247e-75 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 Query: 638 TVGPHFKEANNFLWPFKLKAPLG 706 TVGPHFKEANNFLWPF+LKAPLG Sbjct: 190 TVGPHFKEANNFLWPFQLKAPLG 212
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.624e-75 Identity = 102/144 (70.83%), Postives = 115/144 (79.86%), Query Frame = 3 Query: 105 LKKKKRXXXXXXXXXXXXXXXXXXXXXTRKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 LKK+KR RKLI+NR KQY+KEY E+++ELI+LKREAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIY G ++ Sbjct: 15 LKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKL 158 HSP 2 Score: 69.707 bits (169), Expect = 1.624e-75 Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEIL 636 +RG+GKLN QR ALTDNSI++Q LG+HGIIC+EDLIHEI+ Sbjct: 152 KRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIM 191 HSP 3 Score: 53.5286 bits (127), Expect = 1.624e-75 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 Query: 638 TVGPHFKEANNFLWPFKLKAPLG 706 TVGPHFKEANNFLWPF+LKAPLG Sbjct: 192 TVGPHFKEANNFLWPFQLKAPLG 214
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.756e-75 Identity = 97/112 (86.61%), Postives = 104/112 (92.86%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEG 524 RKLI+ R +QYAKEY E+ ELIRLKREAKLKGGFYV+PEAKLLFIIRIRGINA+DPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIY G Sbjct: 41 RKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRG 152 HSP 2 Score: 74.7146 bits (182), Expect = 2.756e-75 Identity = 33/40 (82.50%), Postives = 39/40 (97.50%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEIL 636 +RGYGKLN QRIALTDNSI++QALG+HGIIC+EDLIHEI+ Sbjct: 150 KRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIM 189 HSP 3 Score: 53.5286 bits (127), Expect = 2.756e-75 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 Query: 638 TVGPHFKEANNFLWPFKLKAPLG 706 TVGPHFKEANNFLWPF+LKAPLG Sbjct: 190 TVGPHFKEANNFLWPFQLKAPLG 212
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.121e-55 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 RKLIY + K Y KEY + + IR+ R A+ G FYV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIY G +I Sbjct: 46 RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKI 161 HSP 2 Score: 67.781 bits (164), Expect = 4.121e-55 Identity = 29/39 (74.36%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI Sbjct: 155 KRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEI 193 HSP 3 Score: 43.5134 bits (101), Expect = 4.121e-55 Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 2 Query: 638 TVGPHFKEANNFLWPFKLKAPLG 706 TVG FKEANNFLWPFKL +P G Sbjct: 195 TVGKRFKEANNFLWPFKLSSPRG 217
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 9.727e-54 Identity = 66/116 (56.90%), Postives = 87/116 (75.00%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 R +I+ R + Y KEY + ++E IRL+R AK G F++ EAKL+F+IRI+GIN + PK +KILQLLRL QI NGVF++V KAT M+ VEP+V YGYPNLKSV+ELIY G ++ Sbjct: 46 RAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKV 161 HSP 2 Score: 72.0182 bits (175), Expect = 9.727e-54 Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RGYGK+NKQR+ALTDNSIIE+ LG++GIICMEDLIHEI Sbjct: 155 KRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEI 193 HSP 3 Score: 43.8986 bits (102), Expect = 9.727e-54 Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 635 WTVGPHFKEANNFLWPFKLKAPLG 706 +TVGP+FK+A+NFLWPFKL P G Sbjct: 194 YTVGPNFKQASNFLWPFKLSNPTG 217
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.143e-53 Identity = 64/115 (55.65%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 192 KLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 K+I++R ++Y KEY E ++E IRL+REAKL G FYV E KL+F+IRI+GI+ + PK +K+LQLLRL QI NGVF+++ KAT +L VEPY+ +GYPNL SVR+L+Y G ++ Sbjct: 48 KVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKV 162 HSP 2 Score: 70.0922 bits (170), Expect = 2.143e-53 Identity = 31/39 (79.49%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RGYGK+NKQRI L+DN+IIE+ALG++GIICMEDLIHEI Sbjct: 156 KRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEI 194 HSP 3 Score: 42.3578 bits (98), Expect = 2.143e-53 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 2 Query: 635 WTVGPHFKEANNFLWPFKLKAPLG 706 +TVGP FK+A+NFLWPFKL P G Sbjct: 195 YTVGPAFKQASNFLWPFKLSNPSG 218
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7C_SCHPO (60S ribosomal protein L7-C OS=Schizosaccharomyces pombe GN=rpl7c PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.272e-49 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 105 LKKKKRXXXXXXXXXXXXXXXXXXXXXTRKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 LKKKK R+LI R + Y EY + ++E I L R+A+ +G +YV E KL+F+IRIRGIN + PK +KI+QLLRL QI NGVF+K NKAT ML VEPYVTYG PNLK+VREL+Y G ++ Sbjct: 21 LKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKV 164 HSP 2 Score: 60.8474 bits (146), Expect = 1.272e-49 Identity = 27/39 (69.23%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RG+GK+NKQRIAL+DN+IIE ALG++ I+ +EDLIHEI Sbjct: 158 KRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEI 196 HSP 3 Score: 43.5134 bits (101), Expect = 1.272e-49 Identity = 16/24 (66.67%), Postives = 22/24 (91.67%), Query Frame = 2 Query: 635 WTVGPHFKEANNFLWPFKLKAPLG 706 +TVGP+FK+A NF+WPF+L +PLG Sbjct: 197 YTVGPNFKQAANFIWPFQLSSPLG 220
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_ASHGO (60S ribosomal protein L7 OS=Ashbya gossypii GN=RPL7 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.173e-49 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 R I R Y KEY+ ++ +I+ KREAK G +YV + KL+F+IRI+GIN + PK +K+LQLLRL QI +GVF+KV KAT +L VEPYV YGYP+ ++R+L+Y G +I Sbjct: 40 RAAILERNAAYHKEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKI 155 HSP 2 Score: 62.3882 bits (150), Expect = 6.173e-49 Identity = 27/40 (67.50%), Postives = 37/40 (92.50%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEIL 636 +RGYGK+NKQRIAL++NSI+E LG++GII ++DLIHEI+ Sbjct: 149 KRGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEII 188 HSP 3 Score: 47.3654 bits (111), Expect = 6.173e-49 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 638 TVGPHFKEANNFLWPFKLKAPLG 706 TVGPHFK+ANNFLWPFKL P G Sbjct: 189 TVGPHFKQANNFLWPFKLSNPSG 211
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.336e-48 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 RKLIY + K Y KEY + + IR+ R A+ G FYV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIY G +I Sbjct: 69 RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKI 184 HSP 2 Score: 67.781 bits (164), Expect = 2.336e-48 Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RGYGK+NK+RIALTDNS+I ++LG+ GIICMEDLIHEI Sbjct: 178 KRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEI 216
BLAST of CF417500 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.338e-48 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 3 Query: 189 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYXEGLRQI 536 RKLIY + K Y KEY + + IR+ R A+ G FYV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIY G +I Sbjct: 46 RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKI 161 HSP 2 Score: 67.781 bits (164), Expect = 2.338e-48 Identity = 29/39 (74.36%), Postives = 38/39 (97.44%), Query Frame = 1 Query: 517 RRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEI 633 +RGYGK+NK+RIALTDN++I ++LG++GIICMEDLIHEI Sbjct: 155 KRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEI 193 The following BLAST results are available for this feature:
BLAST of CF417500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417500 ID=CF417500; Name=CF417500; organism=Citrus sinensis; type=EST; length=713bpback to top |