CF417549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.379e-29 Identity = 72/129 (55.81%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 134 PQCGSSNVFESTNEGNAG--NYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNS---GVGGITERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQ 505 PQCGSSNV+ T EGN NY +NAG N+ SDNGA N G G + SGN+ DE ++QREAALTKFRQKRKERCF K+VRYQSRKKLAEQRPRVRGQFVR+ Sbjct: 583 PQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 711
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.084e-26 Identity = 75/157 (47.77%), Postives = 90/157 (57.32%), Query Frame = 2 Query: 101 DVSFKNMVAAAPQCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSD---ANSGKDTASN 547 DVS +N + APQCGSSNVF+ EG+A NY TA+NA N++ NG SG GG SG+ D QRE AA+ KFRQKRKER FGK+VRYQSRK+LAEQRPRVRGQFVRQ D G++ A++ Sbjct: 585 DVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 5.084e-26 Identity = 75/157 (47.77%), Postives = 90/157 (57.32%), Query Frame = 2 Query: 101 DVSFKNMVAAAPQCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSD---ANSGKDTASN 547 DVS +N + APQCGSSNVF+ EG+A NY TA+NA N++ NG SG GG SG+ D QRE AA+ KFRQKRKER FGK+VRYQSRK+LAEQRPRVRGQFVRQ D G++ A++ Sbjct: 585 DVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.523e-25 Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 137 QCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 535 QCGSSNVF+ EG+A NY TA N G N+++ NG +G GG + SGN + + V REAAL KFRQKRK R FGK+VRYQSRK+LAEQRPR+RGQFVRQ + +G+D Sbjct: 630 QCGSSNVFDPPIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.523e-25 Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 137 QCGSSNVFESTNEGNAGNYXXXXXXXXXXXXXXXXXXXXTALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 535 QCGSSNVF+ EG+A NY TA N G N+++ NG +G GG + SGN + + V REAAL KFRQKRK R FGK+VRYQSRK+LAEQRPR+RGQFVRQ + +G+D Sbjct: 630 QCGSSNVFDPPIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.135e-16 Identity = 40/52 (76.92%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 371 AQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANS 526 +QREAAL KFR KRK+RCF K+VRYQSRKKLAEQRPRV+GQFVR + SDA++ Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSDAST 466
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.037e-15 Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 2 Query: 374 QREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPS 514 QREAALTKFR KRK+RC+ K+VRY+SRKKLAEQRPR++GQFVRQ+ S Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14 Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 341 SGNVVDEV-----WVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQ 505 S NVV E ++QREAAL KFR KRK+RCF K+VRYQSRK LAEQRPRV+GQFVRQ Sbjct: 557 SSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 371 AQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 535 AQREAAL KFR KRKERCF K+VRY SRKKLAEQRP V+GQF+R+ + +D Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSED 494
BLAST of CF417549 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.299e-13 Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 374 QREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKDTASNGHTSEDYSSD 577 +R AAL KFR KRKERCF K+VRY +RKKLAE RPRVRGQFVRQ AN T++ SED D Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ----ANYTDITSTGDDISEDEDDD 505 The following BLAST results are available for this feature:
BLAST of CF417549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417549 ID=CF417549; Name=CF417549; organism=Citrus sinensis; type=EST; length=589bpback to top |