CF417551

Overview
NameCF417551
Unique NameCF417551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1984 contig Csv1_Contig1984:1094..1761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.506e-64
Identity = 113/217 (52.07%), Postives = 150/217 (69.12%), Query Frame = 3
Query:   18 LEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            L+   + A FL Q   LT RSF+NM RD GYYW RL +Y+L+ + + T++ N+GT  ++I ARGS   FV  ++TFM+IGGFPSFVEDMKVF+RERLNGHYG  AFV  NT SA P+L +I+ I G I Y++ GLH G+ H+++FVL L+A + +VESLMM +AS+VPN+                   FFRLPND+P PFW+YP+ YI+FH +A Q
Sbjct:  371 LDSGGSQASFLLQTYTLTKRSFINMSRDFGYYWLRLLIYILVTVCIGTIYLNVGTSYSAILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQ 587          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.283e-47
Identity = 91/215 (42.33%), Postives = 135/215 (62.79%), Query Frame = 3
Query:   24 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            +K + A +  Q   LT+RSF+NM RD+GYYW R+  Y+++ I + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E+MKVF +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+                   FFRL  DLP  FW+YP+ YI++  +A Q
Sbjct:  351 RKGSEATWWKQLRTLTARSFINMCRDVGYYWTRIISYIVVSISVGTIFYDVGYSYTSILARVSCGGFITGFMTFMSIGGFPSFLEEMKVFYKERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQ 565          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.133e-46
Identity = 89/215 (41.40%), Postives = 134/215 (62.33%), Query Frame = 3
Query:   24 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            +K + A +  Q   LT RSFVNM RD+GYYW R+ +Y+++   + T+F ++G    SI AR S   F+  ++TFM+IGGFPSF+E+MKVF +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y +     G  H+ +F L +F  + ++ESLMM+VASLVPN+                   FFRL  DLP  FW+YP+ ++++  +A Q
Sbjct:  352 RKGSEATWFKQLRTLTKRSFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSIGGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQ 566          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.636e-45
Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 3
Query:   24 KKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            KK +  ++  Q  +LT RSF+NM RDLGYYW R+ VY++L I + ++F N+G +  ++ +  +   F+A ++TFM+IGGF SF+E+MKVF RERLNGHYG   +   N  S+LP++ L+ L   +I  Y+     G  HF Y  L L   +  VES MM++AS+VPN+                   FFR   DLP  FW+YP+ YI +  +A Q
Sbjct:  346 KKGSQTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHTNVMSTAACGGFMAGFMTFMSIGGFQSFIEEMKVFSRERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQ 560          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21
Identity = 61/219 (27.85%), Postives = 96/219 (43.84%), Query Frame = 3
Query:   12 GALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            G   K    A   T+  VLT RS + M R+  YYW RL +Y++L + + T++S LG   +S+                              ++  E  N H GA  F+ G    ++P+L L+S+    + Y++ GL   +   +YFVL  F C+L+ E LM+ +A +  +                     FR+   LP P W YP  YI+FH Y+ +
Sbjct:  428 GTQLKSKGKAGAATRVAVLTWRSLLVMSREWKYYWLRLILYMILTLSIGTLYSGLGHSLSSVA-----------------------------IYRSEASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIE 617          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20
Identity = 57/205 (27.80%), Postives = 103/205 (50.24%), Query Frame = 3
Query:   48 LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYA 662
            +T+  +L+SR +  +YR        +   +++G+ L T++ N+GT    I+ R  L  F  ++L   T    P F+++  +  RE  +G Y  ++ +  NT   LPYL LI++I    +Y+L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY                   +F     LP  +W + +Y+ + +KYA
Sbjct:  298 ITEISLLSSRFWKIIYRTRQLLLTNILESLVVGLVLGTIYLNIGTGKEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYA 500          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18
Identity = 56/205 (27.32%), Postives = 99/205 (48.29%), Query Frame = 3
Query:   48 LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYA 662
            +T+  +L  R +  +YR            +++G+ L T++ N+G     I+ R  +  F  ++L   T    P F+ +  +  RE  +G Y  ++ +  NT   LPYL +IS+I    VY+L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY                   +F     LP  +W + +Y+ + +KYA
Sbjct:  310 ITEISLLARRFWKIIYRTRQLLLTNALEALVVGLVLGTIYINIGIGKAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYA 512          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18
Identity = 54/220 (24.55%), Postives = 109/220 (49.55%), Query Frame = 3
Query:    3 QDSGALEKKSTHADF-LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKY 659
            ++ G + KK       +T+   L SR    +YR    +  R    V+ G+GL +V++ L  D+  +  R  L  F  S+L   T+   P ++ + +V  +E   G Y  ++++  NT + +P+L ++SL+    VY++ GL+   Q F +FVL ++  +L+  SL++ ++++ P++                   +F     +P P W + +YY++ ++Y
Sbjct:  333 ENDGIISKKEAFRVLDVTEISYLCSRFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRY 550          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.357e-17
Identity = 50/207 (24.15%), Postives = 103/207 (49.76%), Query Frame = 3
Query:   48 LTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQARGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            L + ++LT R   N++R    +  R    +  GI L  +F NL  D    + R  L  F+ ++L   TI   P F+++ ++  +E  +G Y  +++   N    LP+L +++++    VY+L GL+  +  F++F LL++  +    S+++  ++LVPN+                   +F   +++P  +W + ++YI+  KY ++
Sbjct:  370 LEETMILTHRFSKNIFRTKELFACRTVQMLGSGIVLGLIFHNLKDDLKGARERVGLFAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIP-GYWIF-MHYISLFKYPFE 574          
BLAST of CF417551 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.222e-16
Identity = 52/221 (23.53%), Postives = 107/221 (48.42%), Query Frame = 3
Query:   12 GALEKKSTHAD-FLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLGIGLATVFSNLGTDDNSIQA-RGSLLMFVASYLTFMTIGGFPSFVEDMKVFERERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHKGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYXXXXXXXXXXXXXXXXXXXFFRLPNDLPHPFWKYPLYYIAFHKYAYQ 668
            G L +  +H++  L +  +L  RS  N++R    +  R     + G+ L +++ N+G      +  R     F+ ++L   T  G P F++D ++  RE     Y   ++V  +T   +P+L +IS++    VY+L GL +    F+YF L+++  +L+  S +   ++LVPN+                   +F   + +P  +W++ ++Y++  KY ++
Sbjct:  318 GELHQSDSHSNSVLEEVQILGQRSCKNIFRTKQLFTTRALQASIAGLILGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFE 536          
The following BLAST results are available for this feature:
BLAST of CF417551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
AB11G_ARATH3.506e-6452.07ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH2.283e-4742.33ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH1.133e-4641.40ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH1.636e-4540.93ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH1.262e-2127.85ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB4G_ARATH3.108e-2027.80ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB8G_ARATH1.705e-1827.32ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB23G_ARATH1.705e-1824.55ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB5G_ARATH9.357e-1724.15ABC transporter G family member 5 OS=Arabidopsis t... [more]
AB10G_ARATH1.222e-1623.53ABC transporter G family member 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-481 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417551 ID=CF417551; Name=CF417551; organism=Citrus sinensis; type=EST; length=668bp
CACAGGATTCTGGAGCTCTGGAGAAAAAGAGTACCCATGCTGACTTTCTC
ACTCAATGCATAGTTCTCACAAGCAGATCTTTTGTGAACATGTATCGTGA
TCTAGGTTACTACTGGTTTCGCCTAGGTGTTTATGTCTTATTGGGAATAG
GTCTTGCGACTGTATTTAGCAATCTTGGGACTGACGATAATTCAATTCAG
GCAAGAGGTTCGCTACTCATGTTTGTAGCTTCATATCTAACCTTCATGAC
CATTGGTGGATTCCCTTCTTTTGTTGAGGACATGAAGGTATTTGAGCGAG
AGAGACTAAACGGGCACTACGGTGCCACTGCGTTTGTGTTTGGCAACACA
TTTTCTGCGCTGCCATACTTAGCTCTCATTTCATTGATTCCTGGAGCGAT
AGTTTATTACCTTCCGGGACTTCACAAAGGATATCAACACTTCATATACT
TTGTTTTGTTATTGTTTGCTTGCATGTTGCTCGTCGAGAGCCTAATGATG
ATCGTTGCAAGCTTGGTGCCCAATTATCTGACGGGCATAATAACAGGAGC
TGGAATTCNAGGNCTTATGATATTAGGCGGCGGATTTTTTCGATTGCCAA
ATGATCTTCCTCATCCATTTTGGAAATACCCATTATATTATATTGCTTTC
CATAAATATGCGTACCAG
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