CF417556

Overview
NameCF417556
Unique NameCF417556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig464 contig Csv1_Contig464:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA2_ARATH (Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1)

HSP 1 Score: 459.144 bits (1180), Expect = 1.018e-128
Identity = 216/237 (91.14%), Postives = 230/237 (97.05%), Query Frame = 1
Query:    1 QRWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTIL 711
            QRWA+KGINIRYQIRENR GYKAGALKEGLKRSYVKHCEYV IFDADF+PEPD+LRR+IP+L+ N +IALVQARWRFVNSDECLLTRMQEMSLDYHF VEQEVGS+THAFFGFNGTAG+WRIAAINEAGGWKDRTTVEDMDLAVRASL+GWKF+YLGDLQVKSELPSTF+AFRFQQHRWSCGPANLFRKMVMEI+RNKKV+FWKKVYVIYSFFFVRKIIAH VTF FYCVVLPLTIL
Sbjct:  151 QRWASKGINIRYQIRENRVGYKAGALKEGLKRSYVKHCEYVVIFDADFQPEPDFLRRSIPFLMHNPNIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSSTHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQVKSELPSTFRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHWVTFCFYCVVLPLTIL 387          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA1_ORYSJ (Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.629e-118
Identity = 193/236 (81.78%), Postives = 220/236 (93.22%), Query Frame = 1
Query:    1 QRWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            +RWA KG+NI YQIRENR GYKAGALKEG+K  YV+ CEYVAIFDADF+P+PD+LRR IP+LV NSDIALVQARWRFVN+DECL+TRMQEMSLDYHF VEQEV S+  AFFGFNGTAGVWR++A+NEAGGWKDRTTVEDMDLA+RASLKGWKFVYLGD+QVKSELPSTFKAFRFQQHRWSCGPANLFRKM+MEI+RNKKV  WKK++VIY+FF +RKIIAH+VTF+FYC+++P TI
Sbjct:  138 ERWAHKGVNITYQIRENRKGYKAGALKEGMKHGYVRECEYVAIFDADFQPDPDFLRRTIPFLVHNSDIALVQARWRFVNADECLMTRMQEMSLDYHFTVEQEVSSSVCAFFGFNGTAGVWRVSAVNEAGGWKDRTTVEDMDLAIRASLKGWKFVYLGDVQVKSELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRNKKVTIWKKIHVIYNFFLIRKIIAHIVTFAFYCLIIPATI 373          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA9_ORYSJ (Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 4.904e-115
Identity = 187/237 (78.90%), Postives = 217/237 (91.56%), Query Frame = 1
Query:    1 QRWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTIL 711
            +RW +KG+ I+Y+IR+NR GYKAGAL+EG+K  YV+ C+YVAIFDADF+P+PD+L R IP+LV N DIALVQARW+FVN++ECL+TRMQEMSLDYHFKVEQEVGS+THAFFGFNGTAGVWRI+A+NEAGGWKDRTTVEDMDLAVRA LKGWKFVYLGDL VKSELPSTFKAFR+QQHRWSCGPANLFRKM++EI  NKKV  WKK+YVIY+FF VRKII H+VTF FYC+V+P T+L
Sbjct:  146 KRWESKGVRIKYEIRDNRVGYKAGALREGMKHGYVRDCDYVAIFDADFQPDPDFLARTIPFLVHNPDIALVQARWKFVNANECLMTRMQEMSLDYHFKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVFYCLVVPATVL 382          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA9_ARATH (Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 5.422e-114
Identity = 185/236 (78.39%), Postives = 217/236 (91.95%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTIL 711
            RWA+KG+NI+Y+IR+NR GYKAGALKEG+K+SYVK C+YVAIFDADF+PE D+L R +PYL+ N  +ALVQARW+FVNSDECL+TRMQEMSLDYHF VEQEVGS+T+AFFGFNGTAG+WRI+A+NEAGGWKDRTTVEDMDLAVRASLKGWKF+YLG L+VK+ELPSTFKA+R+QQHRWSCGPANLFRKM  EI+ NK V  WKKV+VIYSFF VRK++AH+VTF FYCV+LP T+L
Sbjct:  152 RWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEADFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNKNVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVL 387          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.689e-107
Identity = 172/236 (72.88%), Postives = 210/236 (88.98%), Query Frame = 1
Query:    1 QRWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            Q+W  KG+NI+Y++R NR GYKAGALKEGLK  YVK CEY+A+FDADF+PE D+L R +P+LV NS+IALVQ RW+FVN++ECLLTR QEMSLDYHFK EQE GS+ ++FFGFNGTAGVWRIAAI++AGGWKDRTTVEDMDLAVRA+L+GWKFVY+GD++VKSELPSTFKA+RFQQHRWSCGPANLF+KM++EI+ NKKV FW K+++ Y FFFV KI AH VTF +YC V+P+++
Sbjct:  172 QKWQGKGVNIKYEVRGNRKGYKAGALKEGLKHDYVKECEYIAMFDADFQPESDFLLRTVPFLVHNSEIALVQTRWKFVNANECLLTRFQEMSLDYHFKYEQEAGSSVYSFFGFNGTAGVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKVKSELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENKKVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSV 407          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA3_ARATH (Probable mannan synthase 3 OS=Arabidopsis thaliana GN=CSLA3 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.385e-107
Identity = 172/236 (72.88%), Postives = 209/236 (88.56%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTIL 711
            +WA KGINI  +IR+NR GYKAGALK G+  +YVK CE+VAIFDADF+P+PD+L R IP+L+ N +I+LVQ RW+FVN++ECL+TRMQEMSL+YHF  EQE GS+ HAFFGFNGTAGVWRIAA+NEAGGWKDRTTVEDMDLAVRA L GWKFVY+ D++VK+ELPSTFKA+RFQQHRWSCGPANL+RKM MEI++NKKV  WKK+Y+IY+FFF+RKI+ H+ TF FYC++LP T+L
Sbjct:  175 KWARKGINIMSEIRDNRIGYKAGALKAGMMHNYVKQCEFVAIFDADFQPDPDFLERTIPFLIHNHEISLVQCRWKFVNANECLMTRMQEMSLNYHFVAEQESGSSIHAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRACLHGWKFVYVHDVEVKNELPSTFKAYRFQQHRWSCGPANLWRKMTMEILQNKKVSAWKKLYLIYNFFFIRKIVVHIFTFVFYCLILPTTVL 410          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLAF_ARATH (Probable mannan synthase 15 OS=Arabidopsis thaliana GN=CSLA15 PE=2 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 1.430e-106
Identity = 172/235 (73.19%), Postives = 203/235 (86.38%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            +WA+K INI Y+ RENR GYKAGALK G++ SYVK C+Y+AIFDADF+PEPDYL+RAIP+L+ N ++ALVQARWRFVN++ CL+TRMQEMSL+YHF  EQ+ GS  HAFFGFNGTAGVWR+ A+ EAGGWKDRTTVEDMDLAVR  L GWKF+++ DL+VKSELPS FKAFRFQQHRWSCGPANL RKM MEII NK+VK WKK YVIYSFFF+RKI+ H  T+ FYCV+LP ++
Sbjct:  166 KWASKDININYERRENRNGYKAGALKHGMRHSYVKQCQYLAIFDADFQPEPDYLQRAIPFLIHNPEVALVQARWRFVNANTCLMTRMQEMSLNYHFMAEQQSGSTRHAFFGFNGTAGVWRMVAMEEAGGWKDRTTVEDMDLAVRVGLLGWKFIFVNDLEVKSELPSQFKAFRFQQHRWSCGPANLIRKMTMEIIHNKRVKIWKKFYVIYSFFFLRKIVVHFFTYFFYCVILPTSV 400          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLAB_ARATH (Probable mannan synthase 11 OS=Arabidopsis thaliana GN=CSLA11 PE=2 SV=2)

HSP 1 Score: 385.185 bits (988), Expect = 1.868e-106
Identity = 173/235 (73.62%), Postives = 202/235 (85.96%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            +WA KGINI+ + R+NR GYKAGALK+G++ SYVK C Y+AIFDADF+PEPDYL R +P+L+ N ++ALVQARW+FVN+ +CL+TRMQEMSL+YHF  EQE GS  HAFFGFNGTAGVWR+AA+ EAGGWKDRTTVEDMDLAVR  L GWKFV++ D+ VKSELPS FKAFRFQQHRWSCGPANLFRKM MEIIRNK+V  WKK+YVIYSFFFVRKII H  TF FYC +LP ++
Sbjct:   68 KWATKGINIKCERRDNRNGYKAGALKQGMRHSYVKTCTYIAIFDADFQPEPDYLERTVPFLIHNPELALVQARWKFVNAKKCLMTRMQEMSLNYHFTAEQESGSTRHAFFGFNGTAGVWRLAAMEEAGGWKDRTTVEDMDLAVRVGLHGWKFVFVNDVSVKSELPSQFKAFRFQQHRWSCGPANLFRKMTMEIIRNKRVTIWKKLYVIYSFFFVRKIIVHFFTFFFYCFILPTSV 302          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLAA_ARATH (Probable mannan synthase 10 OS=Arabidopsis thaliana GN=CSLA10 PE=2 SV=2)

HSP 1 Score: 381.719 bits (979), Expect = 2.065e-105
Identity = 171/235 (72.77%), Postives = 204/235 (86.81%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            +W +KG+NI+ + R+NR GYKAGALKEG+K +YVK C YV IFDADF+PEPDYL+ ++P+LV N ++ALVQARWRF+N+++CL+TRMQEMSL+YHF  EQE GS  HAFF FNGTAGVWR+AA+ EAGGW DRTTVEDMDLAVRA L GWKFV+L DL VKSELPS FKAFRFQQHRWSCGPANLFRKM+MEIIRNK+V  WKK+Y++YSFFF+RKII H  TF FYCV+LP ++
Sbjct:  177 KWESKGVNIKCERRDNRNGYKAGALKEGMKHNYVKLCNYVVIFDADFQPEPDYLQHSVPFLVHNPEVALVQARWRFMNANKCLMTRMQEMSLNYHFMAEQESGSTRHAFFSFNGTAGVWRMAAMEEAGGWHDRTTVEDMDLAVRAGLLGWKFVFLNDLTVKSELPSKFKAFRFQQHRWSCGPANLFRKMIMEIIRNKRVTIWKKLYLVYSFFFLRKIIVHCFTFIFYCVILPTSV 411          
BLAST of CF417556 vs. ExPASy Swiss-Prot
Match: CSLA1_ARATH (Probable mannan synthase 1 OS=Arabidopsis thaliana GN=CSLA1 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 3.895e-104
Identity = 170/235 (72.34%), Postives = 202/235 (85.96%), Query Frame = 1
Query:    4 RWAAKGINIRYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDYLRRAIPYLVQNSDIALVQARWRFVNSDECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTI 708
            +W ++GINIR + R+NR GYKAGA+KE L +SYVK C++VA+FDADF+PEPDYL RA+P+LV N D+ALVQARW FVN+++CL+TRMQEMSL+YHFKVEQE GS  HAFFGFNGTAGVWRI+A+  AGGWK RTTVEDMDLAVR  L GWKFVYL DL V++ELPS FKA+RFQQHRWSCGPANLFRKM MEII NK+V  WKK YVIYSFFFVRK+  H +TF FYC+++P ++
Sbjct:  179 KWQSQGINIRCERRDNRNGYKAGAMKEALTQSYVKQCDFVAVFDADFQPEPDYLIRAVPFLVHNPDVALVQARWIFVNANKCLMTRMQEMSLNYHFKVEQESGSTRHAFFGFNGTAGVWRISAMEAAGGWKSRTTVEDMDLAVRVGLHGWKFVYLNDLTVRNELPSKFKAYRFQQHRWSCGPANLFRKMTMEIIFNKRVSIWKKFYVIYSFFFVRKVAVHFLTFFFYCIIVPTSV 413          
The following BLAST results are available for this feature:
BLAST of CF417556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CSLA2_ARATH1.018e-12891.14Glucomannan 4-beta-mannosyltransferase 2 OS=Arabid... [more]
CSLA1_ORYSJ1.629e-11881.78Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza ... [more]
CSLA9_ORYSJ4.904e-11578.90Probable mannan synthase 9 OS=Oryza sativa subsp. ... [more]
CSLA9_ARATH5.422e-11478.39Glucomannan 4-beta-mannosyltransferase 9 OS=Arabid... [more]
CSLAB_ORYSJ1.689e-10772.88Probable mannan synthase 11 OS=Oryza sativa subsp.... [more]
CSLA3_ARATH8.385e-10772.88Probable mannan synthase 3 OS=Arabidopsis thaliana... [more]
CSLAF_ARATH1.430e-10673.19Probable mannan synthase 15 OS=Arabidopsis thalian... [more]
CSLAB_ARATH1.868e-10673.62Probable mannan synthase 11 OS=Arabidopsis thalian... [more]
CSLAA_ARATH2.065e-10572.77Probable mannan synthase 10 OS=Arabidopsis thalian... [more]
CSLA1_ARATH3.895e-10472.34Probable mannan synthase 1 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-486 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417556 ID=CF417556; Name=CF417556; organism=Citrus sinensis; type=EST; length=711bp
CAAAGATGGGCGGCCAAAGGCATTAACATAAGGTACCAAATCAGAGAGAA
TCGCACGGGATACAAAGCTGGTGCTCTCAAAGAAGGGCTCAAAAGAAGCT
ATGTTAAACATTGTGAATACGTGGCCATTTTCGACGCCGATTTCCGGCCG
GAGCCCGATTATCTCCGACGTGCCATTCCTTACTTAGTCCAAAACTCTGA
CATTGCCCTTGTTCAAGCTCGCTGGAGATTCGTAAATTCAGATGAATGCT
TGTTGACAAGAATGCAAGAGATGTCATTGGATTACCATTTTAAAGTGGAG
CAAGAAGTGGGATCAGCAACTCATGCTTTCTTTGGCTTCAATGGAACTGC
TGGTGTATGGAGAATTGCTGCTATCAATGAGGCAGGTGGCTGGAAGGATC
GAACTACAGTGGAGGACATGGACCTTGCTGTTCGAGCTAGTCTCAAGGGA
TGGAAATTTGTGTACCTCGGTGATCTCCAGGTGAAAAGTGAACTTCCTAG
TACTTTCAAAGCTTTCCGATTCCAGCAGCACCGATGGTCTTGTGGTCCTG
CCAATTTATTCAGGAAAATGGTGATGGAGATTATTAGAAATAAGAAAGTT
AAATTCTGGAAGAAAGTTTATGTTATCTACAGTTTCTTCTTTGTCCGGAA
GATAATTGCCCATATGGTCACATTTTCCTTCTATTGCGTCGTGCTTCCGC
TAACCATTCTG
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