CF417590

Overview
NameCF417590
Unique NameCF417590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.783e-59
Identity = 120/147 (81.63%), Postives = 127/147 (86.39%), Query Frame = 1
Query:  280 IDQVQHPSVMQKVAGQLLHSSLSQNIQDYE----RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            +DQVQHPSVMQKVAGQL  SS SQ+ Q Y      P +YQRR AYGNYSNAA Q+P+   A  DLSMVPSTASAICVQAPAEKGF+ FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRT+KDEG
Sbjct:    1 MDQVQHPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPV--RAFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEG 145          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.142e-52
Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQLLHSSLSQNIQ-DYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            M+DQVQHP++ QK AGQ + SS+S+++Q  Y+RP+MYQR   YGNYSNAAFQ+P  S       M+ +TAS + VQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG
Sbjct:    1 MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSR------MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEG 139          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.368e-51
Identity = 101/149 (67.79%), Postives = 123/149 (82.55%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGI 711
            M++Q QHP+++QKV+GQLL SS+SQ+I+ Y    +RP  YQ+  AYGNYSNAAFQYP+V+A     S + +T S + VQAP EKGF  FAIDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRL+EPYKGI DCF RT++DEGI
Sbjct:    1 MVEQTQHPTILQKVSGQLLSSSVSQDIRGYASASKRPATYQKHAAYGNYSNAAFQYPLVAA-----SQIATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGI 144          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.590e-46
Identity = 100/147 (68.03%), Postives = 112/147 (76.19%), Query Frame = 1
Query:  292 QHPSVMQKVAGQL-LHSSLSQNIQ----DYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVA 717
            QHP+V QKVA Q+ L SSLSQ++       +RP + QRR  YGNYSNA  Q      AT DLS++ + AS + VQAP EKG A FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  A
Sbjct:    4 QHPTVYQKVASQMHLSSSLSQDVHARYGGIQRPALSQRRFPYGNYSNAGLQ---TCQATQDLSLIAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAA 147          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.465e-45
Identity = 100/148 (67.57%), Postives = 113/148 (76.35%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            M D  QHP+V QK A QL L SSLSQ++       +P +YQR  AYGNYSNA  Q      AT DLS++ S AS + VQAP EKGFA FA DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM+K+GRLSEPYKGIG+CF RT+K+EG
Sbjct:    1 MADMNQHPTVFQKAANQLDLRSSLSQDVHARYGGVQPAIYQRHFAYGNYSNAGLQR---GQATQDLSLITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEG 145          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 6.822e-35
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            M DQ   P+V+ K+ GQ  L S +S+ ++        + Y+RR A  NY   +   P +S +      VP   + +C  APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKRT+KDEG
Sbjct:    1 MADQANQPTVLHKLGGQFHLRSIISEGVRARNICPSVSSYERRFATRNYMTQSLWGPSMSVSGG--INVPVMQTPLCANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEG 146          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34
Identity = 85/148 (57.43%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYER-PTM--YQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            M DQ   P+V+ K+ GQ  L SS S+ ++     P+   Y+RR A  NY   +   P +S +      VP   + +   APAEKG   F IDF+MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGI DCFKRT+KDEG
Sbjct:    1 MADQANQPTVLHKLGGQFHLSSSFSEGVRARNICPSFSPYERRFATRNYMTQSLWGPSMSVSGG--INVPVMPTPLFANAPAEKGGKNFMIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEG 146          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32
Identity = 83/156 (53.21%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  277 MIDQVQHPSVMQKVAGQL-LHSSLSQNIQDYE---RPTMYQRRGAYGNYS-----NAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVA 717
            M +Q   P+V+QK  GQ  L SS S+ ++        + Y RR    +Y      N     P++S+            S I   APAEKG   F IDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG  +
Sbjct:    1 MAEQANQPTVLQKFGGQFHLGSSFSEGVRARNICPSVSSYDRRFTTRSYMTQGLVNGGINVPMMSS------------SPIFANAPAEKGGKNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFAS 144          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 1
Query:  460 LSMVPSTASAICVQAPAEK-GFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            +S+   ++S +   AP EK G   FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG
Sbjct:    7 ISVPMMSSSPLFANAPPEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEG 90          
BLAST of CF417590 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1
Query:  505 PAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 708
            P +KG   FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIK+GRLSEPYKGIGDCF RT+KDEG
Sbjct:   23 PEKKGVKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEG 90          
The following BLAST results are available for this feature:
BLAST of CF417590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ADT1_GOSHI1.783e-5981.63ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_ARATH6.142e-5270.34ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT2_ARATH1.368e-5167.79ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT2_SOLTU8.590e-4668.03ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_SOLTU1.465e-4567.57ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT1_MAIZE6.822e-3556.76ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_MAIZE5.775e-3457.43ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT_ORYSJ7.059e-3253.21ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_WHEAT1.799e-2776.19ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT1_WHEAT4.009e-2788.24ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-520 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417590 ID=CF417590; Name=CF417590; organism=Citrus sinensis; type=EST; length=727bp
GAGTTTTTTTTTTTTTTTTTTAAGCACAAGTAAAGGTTCTTCAATGGAAA
CTTAGATACATGGGAGGGTAAAATAAAATGTTTAAAGAGATCAGTTGTCC
CACTTCACCATTTCCAGAAAACATTGGAACCACACTTGTATTTATCTTTC
CCTTTGCACTCCAATTCCAAATCATCCGAGATGAATGGCACTTTCTTTTG
CTTGGCAAGATCTTGGCAGCCTGTGAAGTTCTCAGGGAACTTGCCACCAA
TCTGTCATTTTTAAGGAAAAGTCACAATGATTGATCAGGTTCAACATCCT
TCCGTCATGCAGAAGGTAGCTGGACAGCTCCTTCATTCCAGCCTTTCCCA
AAATATTCAGGATTATGAAAGGCCAACCATGTACCAAAGACGTGGTGCTT
ATGGGAACTACTCCAATGCTGCATTCCAATACCCCATAGTCAGTGCAGCT
ACTACCGATCTATCTATGGTGCCGTCAACTGCATCTGCTATTTGCGTCCA
AGCCCCAGCTGAGAAAGGCTTTGCAGGCTTTGCTATCGATTTCCTTATGG
GTGGAGTTTCTGCTGCTGTGTCCAAAACAGCTGCTGCTCCCATTGAGCGT
GTTAAGCTTTTGATTCAAAACCAAGATGAGATGATCAAGAGTGGTAGGCT
ATCTGAACCCTACAAGGGCATTGGTGATTGTTTTAAGCGTACAATGAAGG
ATGAGGGTATTGTTGCTTTTGTGGAGA
back to top