CF417676

Overview
NameCF417676
Unique NameCF417676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10993 contig Csv1_Contig10993:645..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.553e-48
Identity = 92/98 (93.88%), Postives = 93/98 (94.90%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQLGKYTGEGESEEAK+GMFVKGY Y
Sbjct:  301 AVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 2.162e-47
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQLGKYTGEGESEEAK+GMFVKGY Y
Sbjct:  302 AVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 3.121e-46
Identity = 88/98 (89.80%), Postives = 92/98 (93.88%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQLGKYT +GE+ EAK+GMFVK YVY
Sbjct:  291 AVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.450e-43
Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK +FVKGY Y
Sbjct:  259 AVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.357e-41
Identity = 79/98 (80.61%), Postives = 88/98 (89.80%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQLGKY+ EGE+E+AKKGMFVKGY Y
Sbjct:  294 AVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 2.559e-40
Identity = 82/98 (83.67%), Postives = 87/98 (88.78%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            AVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQLGKY G+GESEEAKK    +GY Y
Sbjct:  253 AVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 2.479e-35
Identity = 78/93 (83.87%), Postives = 79/93 (84.95%), Query Frame = 3
Query:    6 VPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVK 284
            VPGIM LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQLGKYTGEGESEE KK MFVK
Sbjct:  300 VPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.247e-28
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 3
Query:    6 VPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFV--KGYVY 296
            VPGIMFLSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ GKY    E +EA +GM+   KGYVY
Sbjct:  277 VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGYVY 374          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.120e-26
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESE-EAKKGMFVKGYVY 296
            AVPG++FLSGGQSE +ATLNLNA+NQ  G  PW ++FSY RALQ +CL  W G+ EN+ AAQ+ LL RA+ NSLA +GKYTG+  ++  A + +FV  + Y
Sbjct:  266 AVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CF417676 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.993e-26
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 3
Query:    3 AVPGIMFLSGGQSEVEATLNLNAMNQGPN-PWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYVY 296
            A+ G++FLSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ + + TW G   NV+AA+   L RAK NSLAQLGKYTGE  +  A + ++VK Y Y
Sbjct:  259 ALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CF417676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALFC2_ARATH2.553e-4893.88Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH2.162e-4791.84Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ3.121e-4689.80Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA1.450e-4386.73Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH1.357e-4180.61Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA2.559e-4083.67Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL2.479e-3583.87Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE2.247e-2866.67Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_CAEEL6.120e-2656.44Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_DICDI7.993e-2658.59Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-606 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417676 ID=CF417676; Name=CF417676; organism=Citrus sinensis; type=EST; length=456bp
CAGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGGTTGAG
GCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACGT
ATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGGG
GTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCGT
GCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAGA
ATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGCTACGTCTACTAAA
TTTGTTAGCACGAAGATCATAATAATGGTGAAGAAATTTGAAATGAGTAG
TCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTTT
GTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATGA
GATGAG
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