CF417677

Overview
NameCF417677
Unique NameCF417677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.425e-33
Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKI--SPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            +G CL SS+K D +N       A S S   +   +   P G               P +  E +I  SP L+ F+FNELK+ATK+FR + LLGEGGFGCV+KGWI+       +PG+G+ VAVK L  +G QGHKEWL EVN L   +HP
Sbjct:    1 MGNCLDSSAKVDNSNHSPHANSASSGSKVSSKTSRSTGPSGLSTTSYSTDSSFGPLPTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHP 150          

HSP 2 Score: 40.0466 bits (92), Expect = 3.425e-33
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLV L+G C E + RLLVYEFM
Sbjct:  149 HPNLVLLVGYCAEGENRLLVYEFM 172          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 5.817e-33
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            +GGC S+  KTD A+S   T  +    + D S+G                      P+   E+  +  L+ FS +ELKSAT++FRP+ ++GEGGFGCV+KGWI+ +  A  KPGTG+ +AVK LN +G QGH+EWLAE+N L    HP
Sbjct:    1 MGGCFSNRIKTDIASS---TWLSSKFLSRDGSKGSSTASFSYM-------------PRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHP 132          

HSP 2 Score: 45.4394 bits (106), Expect = 5.817e-33
Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLVKLIG C+E++ RLLVYEFM
Sbjct:  131 HPNLVKLIGYCLEEEHRLLVYEFM 154          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.283e-32
Identity = 63/148 (42.57%), Postives = 83/148 (56.08%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            +G CL SS+K D ++       A   S   +   +  VP                 P+   E+  SP L+ F+FNELK+AT++FRP+ LLGEGGFG V+KGWI+       KPG+G+ VAVK L  +G QGHKEWL EVN L   +HP
Sbjct:    1 MGNCLDSSAKVDSSSHSPHANSASLSSRVSSKTSRSTVP-SSLSINSYSSVESLPTPRTEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHP 147          

HSP 2 Score: 44.2838 bits (103), Expect = 1.283e-32
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLVKL+G C+E + RLLVYEFM
Sbjct:  146 HPNLVKLVGYCVEGENRLLVYEFM 169          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.178e-32
Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            +G CLS+  K    + G S +Y  S++ +        V I                P+   E+  SP L+ F+F ELK+AT++FRP+ +LGEGGFG V+KGWI+       KPGTG+ +AVK LN DG QGH+EWLAEVN L  ++HP
Sbjct:    1 MGICLSAQIKA--VSPGASPKYMSSEANDSLGSKSSSVSI-------------RTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHP 133          

HSP 2 Score: 46.9802 bits (110), Expect = 2.178e-32
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLVKLIG C+ED+ RLLVYEFM
Sbjct:  132 HPNLVKLIGYCLEDEHRLLVYEFM 155          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.809e-32
Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN 546
            +G CLS+  K +  +SG ST+Y      +  S+   V                   P+   E+  SP L+ FSF ELKSAT++FRP+ +LGEGGFGCV+KGWI+       +PGTGL +AVK LN DG QGH+EWLAEVN
Sbjct:    1 MGICLSAQVKAE--SSGASTKYDAKDIGSLGSKASSV--------------SVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVN 124          

HSP 2 Score: 41.5874 bits (96), Expect = 4.809e-32
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            H +LVKLIG C+ED+ RLLVYEFM
Sbjct:  131 HRHLVKLIGYCLEDEHRLLVYEFM 154          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.056e-31
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQ-YAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            +G C SS  K D  ++G S+  Y  S S+  +S                         K   E+  S  ++ F+FNELK AT++FRP+ ++GEGGFGCV+KGW++ +     KPGTGL +AVK LN +G QGH+EWL E+N L   +HP
Sbjct:    1 MGSCFSSRVKADIFHNGKSSDLYGLSLSSRKSSSTVAAAQ------------------KTEGEILSSTPVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHP 131          

HSP 2 Score: 46.9802 bits (110), Expect = 3.056e-31
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLVKLIG C+ED+ RLLVYEFM
Sbjct:  130 HPNLVKLIGYCLEDEHRLLVYEFM 153          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.921e-28
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 1
Query:  310 ELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-LSWWAHP 567
            E+  S  ++ FSFNELK AT++FR + ++GEGGFGCV++GW++       K  +GL +AVK LN DG QGH+EWL E+N L   +HP
Sbjct:   39 EILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHP 125          

HSP 2 Score: 48.9062 bits (115), Expect = 2.921e-28
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLVKLIG C+ED+QRLLVYEFM
Sbjct:  124 HPNLVKLIGYCLEDEQRLLVYEFM 147          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.137e-21
Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = 1
Query:  127 IGGCLSSSSKTDGANSGTSTQYAESKSTNDTSRGQPVVPIGXXXXXXXXXXXXXXXPKIGEELKI--SPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN 546
            +G C+S  S +  + +G  +    +  +N T                           I +  K+  SP L+ ++F +LK+ATK+F+P+ +LG+GGFG VY+GW++    A  + G+G+ VA+K LN + +QG  EW +EVN
Sbjct:    1 MGACISFFSSSSPSKTGLHSHATTNNHSNGTEFSSTTGATTNSSVGQQSQFSDISTGIISDSGKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVN 142          

HSP 2 Score: 37.7354 bits (86), Expect = 2.137e-21
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            H NLVKL+G C ED + LLVYEFM
Sbjct:  149 HRNLVKLLGYCREDKELLLVYEFM 172          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.986e-18
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 1
Query:  331 LRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEV 543
            LR FS+ EL  AT  F  + ++GEGGFG VYKG I  NG ++  P   L VA+K LN  GLQGHK+WLAEV
Sbjct:   71 LRVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPP---LVVAIKKLNRQGLQGHKQWLAEV 138          

HSP 2 Score: 36.965 bits (84), Expect = 1.986e-18
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDD----QRLLVYEFM 637
            HPN+VKLIG C ED     +RLLVYE+M
Sbjct:  146 HPNVVKLIGYCSEDGETGIERLLVYEYM 173          
BLAST of CF417677 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.734e-17
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 1
Query:  340 FSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNLSWWAHPP 570
            F+F EL +AT +F P+  LGEGGFG VYKG ++          TG  VAVK L+ +GLQG++E+L EV +    H P
Sbjct:   74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLD---------STGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHP 141          

HSP 2 Score: 43.5134 bits (101), Expect = 2.734e-17
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = 2
Query:  566 HPNLVKLIGCCIEDDQRLLVYEFM 637
            HPNLV LIG C + DQRLLVYEFM
Sbjct:  140 HPNLVNLIGYCADGDQRLLVYEFM 163          
The following BLAST results are available for this feature:
BLAST of CF417677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
APK2A_ARATH3.425e-3344.00Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
NAK_ARATH5.817e-3342.57Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2B_ARATH1.283e-3242.57Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK1B_ARATH2.178e-3242.57Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH4.809e-3245.71Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH3.056e-3140.27Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y3545_ARATH2.921e-2850.57Probable receptor-like protein kinase At3g55450 OS... [more]
CX32_ARATH2.137e-2131.69Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5707_ARATH1.986e-1856.34Probable receptor-like protein kinase At5g47070 OS... [more]
PBS1_ARATH2.734e-1746.75Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-607 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417677 ID=CF417677; Name=CF417677; organism=Citrus sinensis; type=EST; length=638bp
TAGAAGAAGATGGGATTAGGTCTTGAGGATTTCAATGGGGGTGCTTTGAA
CGTGGATAAGTCAAAAAGTAAGAAAAAGAAAGATGGTGAATCTGGAGTCA
CAGGATGTTGGATTAAGTTTAGGTTTATAGGAGGCTGCTTGTCTTCAAGT
TCCAAAACGGACGGTGCCAATAGTGGCACTAGCACTCAATATGCGGAAAG
TAAATCTACAAATGATACCAGTCGAGGTCAACCAGTTGTTCCTATAGGGT
CATCTTCAACAACTAGCAATGCAGAAAGTACAACACCATCCACTCCCAAG
ATAGGCGAGGAACTGAAAATATCTCCTCAGCTTCGTAAATTCTCCTTCAA
TGAGCTTAAGTCAGCAACAAAGAGTTTTAGACCTGAGTGTCTTCTCGGTG
AGGGTGGCTTTGGTTGCGTATATAAAGGTTGGATCAACATGAATGGTACA
GCTACGGTGAAACCTGGCACTGGGCTACCTGTTGCTGTGAAGACCCTCAA
CCACGATGGACTTCAGGGTCATAAGGAATGGCTTGCTGAAGTTAATTTAT
CTTGGTGGGCTCATCCACCCTAATCTGGTTAAGTTAATCGGTTGTTGCAT
TGAGGATGATCAAAGGCTGCTTGTATATGAGTTTATGC
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