CF417686

Overview
NameCF417686
Unique NameCF417686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UCKL1_MOUSE (Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.983e-57
Identity = 117/242 (48.35%), Postives = 166/242 (68.60%), Query Frame = 1
Query:    1 NMKIFVDTDADVRLARRIRRDTVERGRDLDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDL-----------CKIYP-NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSA 684
            +MKIFVDTD+D+RL RR+RRD  ERGRD++ V++QY KFVKPAFD ++ P+ + AD+++PRG  N VAIDLIVQH+H++L + +L           C   P  + V++ST Q+RGMHT+IRD+  S+ +F+FYS RL+RL++EH L  LPF +  V TP G  Y G  +  K++ GVSI+R+GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A
Sbjct:  221 DMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPAFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQLEERELSVRAALASAHQCHPLPQTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCTVQTPQGQDYVGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAA 462          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UCKL1_HUMAN (Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 5.770e-57
Identity = 116/242 (47.93%), Postives = 166/242 (68.60%), Query Frame = 1
Query:    1 NMKIFVDTDADVRLARRIRRDTVERGRDLDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDL-----------CKIYP-NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSA 684
            +MKIFVDTD+D+RL RR+RRD  ERGRD++ V++QY KFVKP+FD ++ P+ + AD+++PRG  N VAIDLIVQH+H++L + +L           C   P  + V++ST Q+RGMHT+IRD+  S+ +F+FYS RL+RL++EH L  LPF +  V TP G  Y G  +  K++ GVSI+R+GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A
Sbjct:  221 DMKIFVDTDSDIRLVRRLRRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHSQLEERELSVRAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRLMRLLIEHALSFLPFQDCVVQTPQGQDYAGKCYAGKQITGVSILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAA 462          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UCKA_DICDI (Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.286e-56
Identity = 115/240 (47.92%), Postives = 159/240 (66.25%), Query Frame = 1
Query:    1 NMKIFVDTDADVRLARRIRRDTVERGRDLDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL----------GQHDL--CKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSA 684
            ++KIF+DTD DVRLARR++RD  ERGR L+SVL QY  FVKP+FDD+++P KKYAD+I+PRG DN VAI+L+  HI  KL           Q DL   ++  +++VI+ T QI+ M +++R++     DFVFYSDRL  L++E  L +LPFTEK V TPTGS+Y G +   ++C + ++R+G  ME  LR+          LI  D      L YEKLPN +++ HVL+LDP +ATG S+
Sbjct:  190 DIKIFIDTDDDVRLARRLKRDIAERGRTLESVLHQYNTFVKPSFDDYIIPLKKYADIIVPRGSDNIVAINLLTNHIRLKLKERGFDPEKTAQLDLEGLELPSSIHVIKETNQIKAMLSILRNKDTKVGDFVFYSDRLCSLIIEEALTYLPFTEKIVTTPTGSLYHGEELNSRICALVVLRAGGCMEQPLRSICKGIRTGKVLIQSDEMKKPHLFYEKLPN-VTDSHVLVLDPTIATGASS 428          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP_ARATH (Uracil phosphoribosyltransferase OS=Arabidopsis thaliana GN=UPT1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.019e-53
Identity = 99/125 (79.20%), Postives = 110/125 (88.00%), Query Frame = 1
Query:  310 MHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSA 684
            MHTLIRD   +KHDFVFYSDRLIRLVVEHGLGHLPFTEKQV+TPTG +Y+GVDFCK+LCGVS++RSGESMENALRA          LIHR+GDNG+QL+YEKLPNDISERHVLLLDP+L TGNSA
Sbjct:    1 MHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGCVYSGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLVYEKLPNDISERHVLLLDPILGTGNSA 125          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP_DICDI (Uracil phosphoribosyltransferase OS=Dictyostelium discoideum GN=uprt PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.256e-34
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1
Query:  265 YP-NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNS 681
            YP NV V++S  Q++G+ T+IR+R   + DF+FYSDR+IRL++E GL  LPF E  + TPTG  Y GV F  K+CGVSIVR+GESME  LRA          LI RD +    +L+Y KLP+DI+ R VLLLDP+LATG +
Sbjct:    3 YPENVVVLKSNHQLKGLFTIIRNRETKREDFIFYSDRIIRLLIEEGLYCLPFHETTITTPTGCEYQGVTFASKICGVSIVRAGESMEAGLRAVCKHIKIGKILIQRDEETALPKLLYAKLPHDIANRQVLLLDPMLATGGT 143          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP_SACKL (Uracil phosphoribosyltransferase OS=Saccharomyces kluyveri GN=FUR1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33
Identity = 74/141 (52.48%), Postives = 94/141 (66.67%), Query Frame = 1
Query:  265 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSA 684
            + NVY++  T Q+ G++T+IRD+   + DFVFYSDR+IRL+VE GL HLP T   V T T   + GV F  K+CGVSIVR+GESME  LR           LI RD +    +L YEKLP+DI++R V LLDP+LATG SA
Sbjct:    6 FKNVYLLPQTNQLLGLYTIIRDKKTKRPDFVFYSDRIIRLLVEEGLNHLPVTPNTVETDTNQSFDGVSFLGKICGVSIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPDDIADRFVFLLDPMLATGGSA 146          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP_YEAST (Uracil phosphoribosyltransferase OS=Saccharomyces cerevisiae GN=FUR1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33
Identity = 73/141 (51.77%), Postives = 96/141 (68.09%), Query Frame = 1
Query:  265 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSA 684
            + NVY++  T Q+ G++T+IR++  ++ DF+FYSDR+IRL+VE GL HLP  ++ V T T   + GV F  K+CGVSIVR+GESME  LR           LI RD +    +L YEKLP DISER+V LLDP+LATG SA
Sbjct:    6 FKNVYLLPQTNQLLGLYTIIRNKNTTRPDFIFYSDRIIRLLVEEGLNHLPVQKQIVETDTNENFEGVSFMGKICGVSIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPEDISERYVFLLDPMLATGGSA 146          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP_TOXGO (Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 74/145 (51.03%), Postives = 96/145 (66.21%), Query Frame = 1
Query:  250 DLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNS 681
            D+   +PNV +++ T Q+R M T+IRD+   K +FVFY+DRLIRL++E  L  LPF +K+V TP    Y GV F  K+CGVSIVR+GESME+ LRA          LI RD    + +LIYEKLP DI +R V+LLDP+ AT  S
Sbjct:   28 DIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFEKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGCRIGKILIQRDETTAEPKLIYEKLPADIRDRWVMLLDPMCATAGS 172          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: UPP1_SCHPO (Probable uracil phosphoribosyltransferase 1 OS=Schizosaccharomyces pombe GN=SPAC1B3.01c PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  271 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLI-YEKLPNDISERHVLLLDPVLATGNSA 684
            NVYV+  T Q++G+ T+IRD+   + +F+FY++R+IRL+VE GL HLP +  +V T   + Y GV F  ++CGVSI+R+GESME  LR           LI RD +  K ++ Y KLP DIS+R+VLLLDP+LATG SA
Sbjct:    9 NVYVLNQTNQLKGLFTIIRDKTKPRSEFIFYANRIIRLIVEEGLNHLPVSSAKVTTAQNAEYEGVMFDGRICGVSIMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRYVLLLDPMLATGGSA 147          
BLAST of CF417686 vs. ExPASy Swiss-Prot
Match: URK1_YEAST (Uridine kinase OS=Saccharomyces cerevisiae GN=URK1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30
Identity = 85/245 (34.69%), Postives = 132/245 (53.88%), Query Frame = 1
Query:    1 NMKIFVDTDADVRLARRIRRDTVERGRDLDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL----GQH--DLCKIYPN----------VYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCK--KLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISE-RHVLLLDPVLATG 675
            ++KI+VD D DV LARR+ RD V RGRDLD  ++Q+ KFVKP    FV P+ K AD IIP   DN  A++LI+ HI +KL     +H  +L K+  +          ++ +  T Q+  +HT++ ++ ++  DFVFY DRL  +++   L  +P     ++TP       V  C+  ++  V+I+RSG+    +LR           LI  D   G+ QL  E LP +I +   V L++  + +G
Sbjct:  180 DLKIYVDADLDVCLARRLSRDIVSRGRDLDGCIQQWEKFVKPNAVKFVKPTMKNADAIIPSMSDNATAVNLIINHIKSKLELKSNEHLRELIKLGSSPSQDVLNRNIIHELPPTNQVLSLHTMLLNKNLNCADFVFYFDRLATILLSWALDDIPVAHTNIITPGEHTMENVIACQFDQVTAVNIIRSGDCFMKSLRKTIPNITIGKLLIQSDSQTGEPQLHCEFLPPNIEKFGKVFLMEGQIISG 424          
The following BLAST results are available for this feature:
BLAST of CF417686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
UCKL1_MOUSE1.983e-5748.35Uridine-cytidine kinase-like 1 OS=Mus musculus GN=... [more]
UCKL1_HUMAN5.770e-5747.93Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=... [more]
UCKA_DICDI1.286e-5647.92Uridine-cytidine kinase A OS=Dictyostelium discoid... [more]
UPP_ARATH1.019e-5379.20Uracil phosphoribosyltransferase OS=Arabidopsis th... [more]
UPP_DICDI5.256e-3453.19Uracil phosphoribosyltransferase OS=Dictyostelium ... [more]
UPP_SACKL1.171e-3352.48Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UPP_YEAST1.529e-3351.77Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UPP_TOXGO3.407e-3351.03Uracil phosphoribosyltransferase OS=Toxoplasma gon... [more]
UPP1_SCHPO3.188e-3149.64Probable uracil phosphoribosyltransferase 1 OS=Sch... [more]
URK1_YEAST2.699e-3034.69Uridine kinase OS=Saccharomyces cerevisiae GN=URK1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-616 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417686 ID=CF417686; Name=CF417686; organism=Citrus sinensis; type=EST; length=688bp
AATATGAAGATTTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAG
AATAAGACGTGACACAGTTGAGAGGGGTAGAGACTTAGATTCTGTTCTCG
AACAGTATGCCAAGTTTGTGAAACCTGCCTTTGATGATTTTGTTCTGCCG
TCAAAAAAGTATGCTGATGTAATCATACCCCGGGGAGGTGATAACCATGT
TGCCATTGATTTGATTGTGCAACATATCCACACAAAGCTTGGTCAGCATG
ACCTCTGCAAAATATATCCCAATGTGTATGTGATTCAGTCAACATTCCAG
ATAAGAGGTATGCATACACTGATTCGAGACCGGGGAATATCGAAGCATGA
TTTTGTGTTTTATTCAGATCGACTAATTCGGCTGGTTGTGGAACATGGCC
TTGGCCATTTGCCATTCACTGAGAAGCAAGTCGTGACCCCAACAGGGTCG
ATGTATACTGGGGTCGATTTTTGCAAGAAGCTATGTGGGGTTTCCATTGT
TCGAAGTGGTGAAAGCATGGAAAATGCATTGCGTGCATGTTGCAAAGGAA
TAAAAATTGGAAAAATTCTGATTCACCGTGATGGGGACAATGGCAAACAG
CTTATCTATGAGAAGCTGCCNAATGATATTTCAGAAAGACATGTCCTGCT
TCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAACC
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