CF417695

Overview
NameCF417695
Unique NameCF417695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5N_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana GN=B'ETA PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.140e-28
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNN+HIENLI QNRKVILPIIFPALE+N   HWNQ V  L
Sbjct:  409 QVAERALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSL 457

HSP 2 Score: 59.6918 bits (143), Expect = 8.140e-28
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 2 
Query:  398 NLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            +LT+NVRKIF ++DPELF ECL KFKE E+K  E   + +A+W+ L
Sbjct:  456 SLTLNVRKIFHDLDPELFKECLAKFKEDESKAAETEAKREATWKRL 501
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5T_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.138e-26
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNNDHIENLI QNRKVILPIIFPALE+N   HWNQ V  L
Sbjct:  388 QVAERALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQAVHSL 436

HSP 2 Score: 54.6842 bits (130), Expect = 1.138e-26
Identity = 24/46 (52.17%), Postives = 36/46 (78.26%), Query Frame = 2 
Query:  398 NLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            +LT+NV+KIF++ID ELF +CL KF+E E+K  EI  + +A+W+ L
Sbjct:  435 SLTLNVQKIFNDIDAELFKDCLAKFREDESKEAEIGAKREATWKRL 480
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5D_ARATH (Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform OS=Arabidopsis thaliana GN=B'DELTA PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.206e-26
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERALYLWNNDH+ NL+RQN ++ILPI+FPALEKNG +HWNQ V+ L
Sbjct:  376 QVAERALYLWNNDHVTNLVRQNSRIILPIVFPALEKNGSSHWNQAVKNL 424

HSP 2 Score: 49.6766 bits (117), Expect = 7.206e-26
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 2 
Query:  395 RNLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            +NLT NV K+ S+ +P+LF+ECL KF+E + K E+ + +   +W  L
Sbjct:  422 KNLTENVLKVLSDTNPDLFEECLHKFQEDQQKAEDTKKKNGETWRQL 468
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5G_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana GN=B'GAMMA PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.003e-24
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNNDHI NLI QN KVI+PI+FPA+E+N   HWNQ VQ L
Sbjct:  397 QVAERALFLWNNDHIRNLITQNHKVIMPIVFPAMERNTRGHWNQAVQSL 445

HSP 2 Score: 51.9878 bits (123), Expect = 1.003e-24
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 2 
Query:  395 RNLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            ++LT+NVRK+ +E D  LFDECL KF+E EA   E+  + +A+W+ L
Sbjct:  443 QSLTLNVRKVMAETDQILFDECLAKFQEDEANETEVVAKREATWKLL 489
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5Z_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform OS=Arabidopsis thaliana GN=B'ZETA PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.305e-24
Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNNDHI NLI QN KVI+PI+FPALE+N   HWNQ VQ L
Sbjct:  418 QVAERALFLWNNDHIRNLITQNHKVIMPIVFPALERNTRGHWNQAVQSL 466

HSP 2 Score: 50.8322 bits (120), Expect = 1.305e-24
Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 2 
Query:  395 RNLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEALGRDCCCKFYQVVKQLLYAP*YLS 604
            ++LT+NVRK+  EID  LFDECL KF+  E    E++ + + +W+ L  D       V  + +  P ++S
Sbjct:  464 QSLTINVRKVLCEIDQVLFDECLAKFQVEEVNKTEVKAKRERTWQRL-EDLATSKTVVTNEAVLVPRFVS 532
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5B_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.495e-22
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNN+HI  LI QNR VILPII+P LEKN  +HWNQ V  L
Sbjct:  387 QVAERALFLWNNEHIVGLIAQNRSVILPIIYPTLEKNIQSHWNQAVHGL 435

HSP 2 Score: 51.9878 bits (123), Expect = 1.495e-22
Identity = 20/45 (44.44%), Postives = 34/45 (75.56%), Query Frame = 2 
Query:  401 LTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            LT N++K+F E+DPELF+EC ++++E +AK +E+  Q   +W+ L
Sbjct:  435 LTTNIKKMFMEMDPELFEECQRQYEEKQAKSKEVEEQRQYTWKRL 479
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5E_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform OS=Arabidopsis thaliana GN=B'EPSILON PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.065e-19
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERAL+LWNN+HI  LI QN+ VI PIIF ALE+N   HWNQ V  L
Sbjct:  396 QVAERALFLWNNEHIVGLIAQNKDVIFPIIFEALERNMKGHWNQAVHGL 444

HSP 2 Score: 45.4394 bits (106), Expect = 3.065e-19
Identity = 20/45 (44.44%), Postives = 33/45 (73.33%), Query Frame = 2 
Query:  401 LTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            L+ NVR++F E+D ELF+EC +++ E+EAK  E+  Q + +W+ L
Sbjct:  444 LSENVRRMFLEMDTELFEECEKQYLENEAKACELLEQRELTWKRL 488
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5I_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform OS=Arabidopsis thaliana GN=B'IOTA PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.182e-19
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 1 
Query:  214 LFIN*ILATXXXXXQVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            LF+           QV+ERAL+LWNND I NLI  NR+ ILPI+F ALEKN  NHWNQ V  L
Sbjct:  368 LFLRIACCVTSSHFQVSERALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQSVLNL 430

HSP 2 Score: 42.3578 bits (98), Expect = 5.182e-19
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 2 
Query:  398 NLTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDAS 523
            NLT+NVRK+F E+D  LF  C  +FKE EAK      QC A+
Sbjct:  429 NLTLNVRKMFCEMDEALFMSCHARFKEDEAK------QCSAA 464
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5D_HUMAN (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Homo sapiens GN=PPP2R5D PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.218e-13
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERALY WNN++I +LI  N   +LPI+FPAL +N  +HWN+ +  L
Sbjct:  417 QVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 465

HSP 2 Score: 31.9574 bits (71), Expect = 7.218e-13
Identity = 13/45 (28.89%), Postives = 25/45 (55.56%), Query Frame = 2 
Query:  401 LTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            L  N  K+F E++ +LFD+C Q++K  + K      + +  W+ +
Sbjct:  465 LIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKI 509
[Close]
BLAST of CF417695 vs. ExPASy Swiss-Prot
Match: 2A5D_RABIT (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform OS=Oryctolagus cuniculus GN=PPP2R5D PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.224e-13
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  256 QVAERALYLWNNDHIENLIRQNRKVILPIIFPALEKNGCNHWNQVVQKL 402
            QVAERALY WNN++I +LI  N   +LPI+FPAL +N  +HWN+ +  L
Sbjct:  401 QVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGL 449

HSP 2 Score: 31.9574 bits (71), Expect = 7.224e-13
Identity = 13/45 (28.89%), Postives = 25/45 (55.56%), Query Frame = 2 
Query:  401 LTVNVRKIFSEIDPELFDECLQKFKESEAKVEEIRTQCDASWEAL 535
            L  N  K+F E++ +LFD+C Q++K  + K      + +  W+ +
Sbjct:  449 LIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKI 493
The following BLAST results are available for this feature:
BLAST of CF417695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
2A5N_ARATH8.140e-2879.59Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5T_ARATH1.138e-2681.63Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5D_ARATH7.206e-2675.51Serine/threonine protein phosphatase 2A 55 kDa reg... [more]
2A5G_ARATH1.003e-2473.47Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5Z_ARATH1.305e-2475.51Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5B_ARATH1.495e-2271.43Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5E_ARATH3.065e-1967.35Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5I_ARATH5.182e-1957.14Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5D_HUMAN7.218e-1355.10Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]
2A5D_RABIT7.224e-1355.10Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-625 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417695 ID=CF417695; Name=CF417695; organism=Citrus sinensis; type=EST; length=665bp
TCCCCATGGTAAGTTCTTGGTTAGTACTTAGTAACTGGAAAAATCTGTTC
CAGTCATTTCAAGTTTGAGTCAGTCAACTGTCAAAAAGTCTCCAATGCCG
TTTCACATATGGGCAGATGTTTTTTTATTTAATTCAAGTTCCCTGAATGA
GGTTCCCATTTTAGAGTCTATGCGGAATATTCTCTTTCTGTTTGCTGGTA
TAAAAATCCTTGTCTGTTTATAAATTAAATTTTGGCCACTTTATGATTGC
TTTTACAGGTGGCCGAGAGGGCTTTGTATCTGTGGAACAATGATCACATT
GAGAATTTAATCAGACAAAACAGGAAAGTTATTCTGCCCATTATCTTTCC
TGCCTTGGAAAAAAATGGTTGTAACCACTGGAATCAGGTGGTCCAGAAAC
TTGACAGTTAATGTCCGCAAGATATTCTCTGAAATTGATCCTGAGCTATT
TGATGAGTGTTTGCAAAAATTCAAAGAGAGTGAAGCAAAAGTGGAGGAGA
TCAGAACCCAATGTGATGCCTCATGGGAAGCGCTTGGAAGAGATTGCTGC
TGCAAATTCTACCAAGTAGTGAAGCAGTTATTGTACGCTCCATGATACCT
AAGCAAACATCTTCAAGCAAGTGATATGAAGACATTTTTTGTGCAGTTAA
GGGTTGCAATTTTAC
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