CF417700

Overview
NameCF417700
Unique NameCF417700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1610 contig Csv1_Contig1610:53..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 6.582e-93
Identity = 153/193 (79.27%), Postives = 171/193 (88.60%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNS--RVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            A+T+  +NKC+HPVWPGIQ SAG+ LLA GGFKLP NKA++++LPPLWSGRFWGRHGC FD SGRG CATGDCGGSL CNG GG PPATLAEITLG + DFYDVSLVDGYN+AMSI+P++GSG+CSYAGCVSDLN MCP GLQVRS +  RVVACKSAC AFNSP+YCCTG FGNPQSCKPTAYS+IFK ACP
Sbjct:   20 ASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACP 212          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.061e-58
Identity = 114/195 (58.46%), Postives = 128/195 (65.64%), Query Frame = 1
Query:  112 IKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            + AT  TL N C   VW G  A  G P L  GGF+L P  +  +  P  WSGRFW R GC FDASG GRC TGDCGG L CNG GG PP TLAE TL     +DFYDVSLVDGYN+ + I P  GSG C YAGCVSDLN  CP  L+V   + VVACKSAC  FN+ +YCC G+   P++C PT YSRIFK ACP
Sbjct:   21 VMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACP 212          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54
Identity = 102/201 (50.75%), Postives = 129/201 (64.18%), Query Frame = 1
Query:  100 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            F     A  IT  NKC + VWPG      KP L+  GF+L    + ++  P  WSGRF+GR  C  DASG+  CAT DCG G + CNG G +PPATL EIT+     QDFYDVSLVDG+N+ MS+ P  G+GKC  + C +D+N +CPA LQV+ S+  V+ACKSAC AFN P+YCCT     P++C P  YS++FK  CP
Sbjct:   18 FFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCP 218          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.099e-53
Identity = 93/197 (47.21%), Postives = 127/197 (64.47%), Query Frame = 1
Query:  112 IKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            + +   T  NKC + VWPG     G P L   GF+L    + ++ +   WSGRFWGR  C  D+SG+ +C+TGDCG G + CNG G SPPA+L E+TL     QDFYDVSLVDG+N+ + + P  GSG C+   C +++N +CPA L  + S+  V+ CKSAC A N P+YCCTG++G P +C PT +S++FK  CP
Sbjct:   20 VYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCP 216          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.256e-51
Identity = 92/192 (47.92%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  127 ITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG---QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            + + N C   VWPG+  +AG P    GGF L   +   + +P  WSGR W R GC FD+ GRG CATGDCGG L CNG  G+ PAT+ E+TLG       FYDVSLVDG+N  +S+  + G   C  A C +D+N+ CP+ L+VR    RV  C+SAC A    RYCCTG + +P +C+PT +S +FKA CP
Sbjct:   31 LIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICP 222          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.093e-50
Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDC-GGSLFCNGIGGSPPATLAE--ITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            A TI+  N C + VWPG   S  KP L+  GF+L    ++ +  P  W+GRFW R GC  DASG+  CAT DC  G + CNG G  PPATLAE  I  G  QDFYDVSLVDG+N+ MS+ P  G+G C  A C +++N +CP+ LQ + S+  VVAC SAC  F +P+YCCT     P++C PT YS IF  ACP
Sbjct:   23 AATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACP 217          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.891e-50
Identity = 94/201 (46.77%), Postives = 124/201 (61.69%), Query Frame = 1
Query:  100 FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            F     A  IT  N C + VWPG      KP L+  GF+L    + ++  P  WSGRFWGR  C  DA+G+  C T DCG G + CNG G  PPATL EIT+     QD+YDVSLVDG+N+ MS+ P  G+G+C  + C +++N +CPA LQV+ ++  V++CKSAC AF   +YCCT     P++C PT YS IF+  CP
Sbjct:   18 FFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCP 218          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.201e-47
Identity = 95/195 (48.72%), Postives = 119/195 (61.03%), Query Frame = 1
Query:  118 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDC-GGSLFCNGIGGSPPATLAEITL--GQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQ-VRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            A T++  N C + VWP   AS G P L+  GF+L    ++ +  P  WSGRFW R  C  DASG+  C T DC  G L CNG  G PPATLAE T+  G  QDFYDVSLVDG+N+ MS+ P  G+G C    C +++NL+CP+ LQ + S+  VVAC SAC  F  P+YCCT      + C PT YS+IF   CP
Sbjct:   23 AATMSFKNNCPYTVWP---ASFGNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCP 214          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.216e-46
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 1
Query:  127 ITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPL-WSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ-QQDF--YDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSR---VVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            +TL N C + +WP IQ +AG P+L RGGF L      +   P   WSGR W R GC +   G+  CATGDCGG + C+G+GG+ PATLA+  L     DF  Y VSLVDG+NI +++ P  G G C   GC ++L   CPA LQ RS+     VV CKSAC AF S  +CC   + +PQ+CKP++YS+ FK ACP
Sbjct:   31 LTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACP 224          
BLAST of CF417700 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.589e-46
Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
Query:  157 VWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACP 690
            VWPG      KP L+   F+L    + ++  P  WSGRFWGR  C  DA+G+  C T DCG G + CNG G  PPATL EIT+     QD+YDVSLVDG+N+ MS+ P  G+G+C  + C +++N+ CPA LQV+ ++  V++CKSAC AF   +YCCT     P++C PT YS IF+  CP
Sbjct:    3 VWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCP 184          
The following BLAST results are available for this feature:
BLAST of CF417700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLPH_ARATH6.582e-9379.27Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
PR5_ARATH1.061e-5858.46Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PRUPE7.866e-5450.75Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY5.099e-5347.21Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLPH_ORYSJ1.256e-5147.92Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_PRUAV3.093e-5050.26Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1A_MALDO6.891e-5046.77Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP2_PRUPE3.201e-4748.72Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
OLP1_SOLLC1.216e-4648.21Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TP1B_MALDO1.589e-4647.80Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-630 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417700 ID=CF417700; Name=CF417700; organism=Citrus sinensis; type=EST; length=690bp
CTGCCTTCAAAATCTTTTGCTTTTTGCTGAGTTTCAGCCATGGCAGTAAC
AATGCTGCTTAGATCTCTACTCGCTCTCTTGCTCACCACCATCGTCCTCT
TCTCTCACAATATCAAAGCTACAACAATCACATTATTCAACAAATGCGAG
CACCCAGTTTGGCCCGGAATACAAGCGAGCGCAGGCAAGCCACTACTGGC
ACGTGGCGGCTTCAAGCTCCCACCAAACAAGGCCTACACCATACGCCTAC
CGCCCCTCTGGTCCGGGCGCTTCTGGGGTCGCCATGGATGCAGGTTCGAC
GCCTCAGGCCGGGGCCGCTGCGCCACCGGGGACTGCGGCGGATCGCTCTT
CTGCAACGGCATAGGCGGCAGCCCGCCGGCCACCCTCGCCGAAATCACGC
TGGGGCAGCAGCAGGACTTCTACGACGTGAGCCTGGTCGACGGTTACAAC
ATCGCAATGTCGATTTTGCCCATCAGAGGCTCCGGGAAATGCAGCTACGC
TGGGTGTGTGAGTGACCTGAACTTGATGTGTCCCGCGGGGCTACAAGTGA
GGTCCAACAGCAGAGTGGTGGCCTGCAAAAGTGCTTGTTTCGCTTTCAAC
TCGCCCAGGTATTGCTGCACTGGGAGCTTTGGGAATCCTCAATCCTGCAA
GCCCACTGCTTACTCCAGGATTTTCAAGGCCGCTTGTCCC
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