CF417716

Overview
NameCF417716
Unique NameCF417716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:303..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 4.845e-109
Identity = 200/226 (88.50%), Postives = 206/226 (91.15%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI VCFDIDANG LNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVEAKN LENYAY MRNTIKDEKI++KL A D+ KIEDAIEQAIQWLDGNQLAEA+EFEDKMK
Sbjct:  378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 393.275 bits (1009), Expect = 6.328e-109
Identity = 198/226 (87.61%), Postives = 205/226 (90.71%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQ AILSGEGNEKVQD             ETAGGVMT LIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKVEAKN LENYAY MRNTI+DEKI  KLPAADKKKIED+IEQAIQWL+GNQLAEADEFEDKMK
Sbjct:  378 GAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 389.037 bits (998), Expect = 1.193e-107
Identity = 196/226 (86.73%), Postives = 204/226 (90.27%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVE+KN LENYAY MRN +KDEKI AKL  ADKKKIE+AI+ +IQWLDGNQLAEADEF+DKMK
Sbjct:  378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 387.497 bits (994), Expect = 3.472e-107
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGGVMT LI RNTTIPTKKEQVFSTYSDNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTG+KNKITITNDKGRLSKE+IEKMVQEAEKYK+ED+EHKKKVEAKN LENYAY MRNTI+DEKI  KLPAADKKK+ED+IE+AIQWLDGNQL EADEFEDKMK
Sbjct:  378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 1.905e-105
Identity = 193/226 (85.40%), Postives = 205/226 (90.71%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGG MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIE+MVQEAEKYK+ED+E KKKVEAKN LENYAY MRNTIKD+KI+++L AADKK+IEDAI++AI+WLD NQLAEADEFEDKMK
Sbjct:  378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.107e-104
Identity = 191/226 (84.51%), Postives = 200/226 (88.50%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGGVMTVLI RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKV+AKN LENYAY MRNTI+DEKI  KL   DKKKIED+IE AI+WL+ NQLAE DEFEDKMK
Sbjct:  378 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMK 603          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 1.972e-102
Identity = 192/227 (84.58%), Postives = 200/227 (88.11%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER-TRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGER  RTRDNNLLGKFELS IPPAPR VPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKVEAKN LENYAY MRNT+KDEKI +KL + DKKKIEDA++QAI WL+ NQLAE DEFEDKMK
Sbjct:  379 GAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERRARTRDNNLLGKFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMK 605          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 367.081 bits (941), Expect = 4.856e-101
Identity = 188/226 (83.19%), Postives = 198/226 (87.61%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSGEGNE+  D             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V FDID N ILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKV+AKN LENYAY MRNTIKD+KI++KLPA DKKKIEDA++ AI WLD NQLAE +EFEDKMK
Sbjct:  375 GAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMK 599          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.845e-100
Identity = 182/226 (80.53%), Postives = 198/226 (87.61%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAILSG+G+EKVQD             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+NVCFDIDANGILNVSAEDKT G KNKITITNDKGRLSKEEIEKMV++AE+YKAED+E KKKVEAKN LENYAY MRNTIKDEKI  KL   +K+KIE A+E AIQWL+GNQ+AE DEFEDK K
Sbjct:  377 GAAVQAAILSGQGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQK 602          
BLAST of CF417716 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 7.510e-94
Identity = 173/226 (76.55%), Postives = 194/226 (85.84%), Query Frame = 3
Query:    3 GAAVQAAILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNGLENYAYXMRNTIKDEKISAKLPAADKKKIEDAIEQAIQWLDGNQLAEADEFEDKMK 680
            GAAVQAAIL+GEG EKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQINV FDIDANGILNVSAEDKTTG KNKITITNDKGRLSK+EIE+MVQEAEKYKA DDE  KKVEAKN LENYAY MRNTI+++K++++L A+DK+ +E A+  A+ WL+ NQ+AE +EFE  +K
Sbjct:  378 GAAVQAAILTGEGGEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVIFDIDANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQEAEKYKA-DDEQLKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLK 602          
The following BLAST results are available for this feature:
BLAST of CF417716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC4.845e-10988.50Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_ARATH6.328e-10987.61Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7E_SPIOL1.193e-10786.73Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_ARATH3.472e-10785.84Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP7C_PETHY1.905e-10585.40Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH2.107e-10484.51Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP71_SOLLC1.972e-10284.58Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_MAIZE4.856e-10183.19Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN1.845e-10080.53Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_CHLRE7.510e-9476.55Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-646 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417716 ID=CF417716; Name=CF417716; organism=Citrus sinensis; type=EST; length=681bp
ACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTAATGAGAAG
GTTCAGGACCTCTTATTGCTTGATGTCACCCCTCTGTCACTGGGTTTGGA
GACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTC
CAACCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGG
GTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAA
CTTGCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGG
TTCCACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAAC
GTTTCTGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCAC
AAATGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAG
AGGCAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAG
GCGAAGAATGGTCTTGAGAATTATGCTTACNACATGAGAAACACAATCAA
GGATGAAAAGATCAGCGCAAAGCTTCCTGCTGCTGACAAGAAGAAAATTG
AAGATGCCATTGAGCAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCA
GAGGCAGATGAGTTTGAAGATAAGATGAAAG
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