CF417722

Overview
NameCF417722
Unique NameCF417722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8758 contig Csv1_Contig8758:104..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPA_SYNY3 (Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain PCC 6803) GN=ctpA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26
Identity = 73/225 (32.44%), Postives = 126/225 (56.00%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHS-GKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPGVWLKQDLMLPKYG*METRLL*TQLTGKDIRYLLTWVDGHAITHDPLV 675
            +PFTR++ P++Y + ++ + G L GVGL I++ P T  L +++ +  SPA  AG+   D+++ I+G     +  + AA ++RG   T V++++ S G +V      +E  + R  I LSP++  +   R         GY++LS FS  A  ++A+ +H+LE +GA  YILDLRNNPG  L+  + + +    E+ ++ T +  +  +   T  +G A T  PLV
Sbjct:   91 EPFTRLLRPEQYGNLQVTTTGELSGVGLQININPETNQLEIMAPLAGSPAEEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVSLEILSAGTEV-----PQEFTLTRQLISLSPVAAQLDDSRPGQ----SVGYIRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPGGLLQAGIDIARLWLPESTIVYT-VNRQGTQESFT-ANGEAATDRPLV 304          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPA_SYNP2 (Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 66/197 (33.50%), Postives = 110/197 (55.84%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG-----------VWLKQDLML 561
            DP+TR++ P++Y+S ++ + G L GVGL I+V P    L V+  +  SPA  AGI   D+++ I+G     I  E AA ++RG+ G+ V++ V S K        R V + R  I L+P+       +  + +  K GY++L+ FS  A  ++  ++++L+ +GA  Y+LDLRNNPG           +WL Q+ ++
Sbjct:   89 DPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVDVLEVILPLPGSPAEAAGIEAKDQILAIDGIDTRNIGLEEAAARMRGKKGSTVSLTVKSPK----TDTVRTVKVTRDTIALNPVY-----DKLDEKNGEKVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPGGLLQAGIEIARLWLDQETIV 276          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPB_BACSU (Carboxy-terminal processing protease ctpB OS=Bacillus subtilis GN=ctpB PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19
Identity = 56/184 (30.43%), Postives = 96/184 (52.17%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTRE---VNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPGVWLK 546
            DP++  +  +  + F    D + +G+G  + +E   G ++++S  + SPA +AG+   DE+I INGE + G D   A LK+RG+ G+ V++K+       +  GT++     I R  I   P+       +   GH    GY+ +S FS+  A D A  + ELE +     ++D+R NPG +L+
Sbjct:   89 DPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMED--GKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKI-------QRPGTKKQLSFRIKRAEI---PLETVFASEKKVQGH--SVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQ 258          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPA_BACSU (Carboxy-terminal processing protease ctpA OS=Bacillus subtilis GN=ctpA PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 57/188 (30.32%), Postives = 104/188 (55.32%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHL--TKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPGVWLKQDLML 561
            DP++  +  ++ +SF      + +G+G    VE + G ++++S ++ SPA +AGI   D++I++NG+ + G++   A   +RG+ GT V ++++        +G        G I LS I R  IP  T    +     G +++++FS+T A ++ + I  LE +GA  YILDLR NPG  ++Q + +
Sbjct:   81 DPYSTYMDQEQAKSFDETISASFEGIGA--QVEEKDGEILIVSPIKGSPAEKAGIKPRDQIIKVNGKSVKGMNVNEAVALIRGKKGTKVKLELN-------RAGV-------GNIDLS-IKRDTIPVETVYSEMKDNNIGEIQITSFSETTAKELTDAIDSLEKKGAKGYILDLRGNPGGLMEQAITM 251          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPA_BARBK (Carboxy-terminal-processing protease OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 52/187 (27.81%), Postives = 100/187 (53.48%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHS-GKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELES----EGAHSYILDLRNNPGVWLKQ 549
            DP +  +  ++ +  R  + G   G+G+ +++E     + V+S ++D+PAA+AG+  GD + +I+G+++ G     A  ++RG AGTP+T+ ++  G D        ++ I R  IK+  +   +      +G +   GY++L  F++   +D+   I +++S    +    Y+LDLR NPG  L Q
Sbjct:   73 DPHSSYMDAEKAKDMRDSTKGEFGGLGIEVTMENNL--IKVVSPIDDTPAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMRGPAGTPITLTINRFGVD-----KPLDIKIVRDIIKVKAVKYRV------EGDI---GYLRLIQFTEKTFSDLQAAIKDIQSKIPTDKLKGYVLDLRLNPGGLLDQ 243          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAW (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain MW2) GN=MW1310 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG 534
            DP++  ++ ++ +SF  G  G+  G+G    ++ +   ++V S ++ SPA RAGI   D + ++NG+ + G   +     +RG+  T VT+ V  G      S  ++V I R  I +  +               K G + ++ F    + ++ + + +   +G    +LDLRNNPG
Sbjct:  113 DPYSEYLTKEQTKSFNEGVSGDFVGIGA--EMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRG------SEEKDVKIKREKIHVKSVEYK---------KKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPG 272          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAS (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain MSSA476) GN=SAS1363 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG 534
            DP++  ++ ++ +SF  G  G+  G+G    ++ +   ++V S ++ SPA RAGI   D + ++NG+ + G   +     +RG+  T VT+ V  G      S  ++V I R  I +  +               K G + ++ F    + ++ + + +   +G    +LDLRNNPG
Sbjct:  113 DPYSEYLTKEQTKSFNEGVSGDFVGIGA--EMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRG------SEEKDVKIKREKIHVKSVEYK---------KKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPG 272          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAR (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain MRSA252) GN=SAR1432 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG 534
            DP++  ++ ++ +SF  G  G+  G+G    ++ +   ++V S ++ SPA RAGI   D + ++NG+ + G   +     +RG+  T VT+ V  G      S  ++V I R  I +  +               K G + ++ F    + ++ + + +   +G    +LDLRNNPG
Sbjct:  113 DPYSEYLTKEQTKSFNEGVSGDFVGIGA--EMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRG------SEEKDVKIKREKIHVKSVEYK---------KKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPG 272          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAN (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain N315) GN=SA1253 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG 534
            DP++  ++ ++ +SF  G  G+  G+G    ++ +   ++V S ++ SPA RAGI   D + ++NG+ + G   +     +RG+  T VT+ V  G      S  ++V I R  I +  +               K G + ++ F    + ++ + + +   +G    +LDLRNNPG
Sbjct:  113 DPYSEYLTKEQTKSFNEGVSGDFVGIGA--EMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRG------SEEKDVKIKREKIHVKSVDYK---------KKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPG 272          
BLAST of CF417722 vs. ExPASy Swiss-Prot
Match: CTPAL_STAAM (Probable ctpA-like serine protease OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13
Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    4 DPFTRIISPKEYQSFRIGSDGNLQGVGLFISVEPRTGHLVVLSCVEDSPAARAGIHEGDELIEINGERLDGIDSEAAALKLRGRAGTPVTVKVHSGKDVGRESGTREVNIPRGYIKLSPISRTIIPHRTPDGHLTKTGYVKLSAFSQTAAADMANTIHELESEGAHSYILDLRNNPG 534
            DP++  ++ ++ +SF  G  G+  G+G    ++ +   ++V S ++ SPA RAGI   D + ++NG+ + G   +     +RG+  T VT+ V  G      S  ++V I R  I +  +               K G + ++ F    + ++ + + +   +G    +LDLRNNPG
Sbjct:  113 DPYSEYLTKEQTKSFNEGVSGDFVGIGA--EMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRG------SEEKDVKIKREKIHVKSVDYK---------KKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPG 272          
The following BLAST results are available for this feature:
BLAST of CF417722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CTPA_SYNY31.748e-2632.44Carboxyl-terminal-processing protease OS=Synechocy... [more]
CTPA_SYNP28.676e-2633.50Carboxyl-terminal-processing protease OS=Synechoco... [more]
CTPB_BACSU2.703e-1930.43Carboxy-terminal processing protease ctpB OS=Bacil... [more]
CTPA_BACSU1.342e-1830.32Carboxy-terminal processing protease ctpA OS=Bacil... [more]
CTPA_BARBK1.299e-1327.81Carboxy-terminal-processing protease OS=Bartonella... [more]
CTPAL_STAAW4.938e-1325.42Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAAS4.938e-1325.42Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAAR4.938e-1325.42Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAAN4.938e-1325.42Probable ctpA-like serine protease OS=Staphylococc... [more]
CTPAL_STAAM4.938e-1325.42Probable ctpA-like serine protease OS=Staphylococc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-652 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417722 ID=CF417722; Name=CF417722; organism=Citrus sinensis; type=EST; length=675bp
GGAGATCCGTTTACTCGAATTATTAGTCCCAAGGAGTACCAAAGTTTTAG
AATTGGAAGCGACGGAAATTTGCAAGGAGTTGGCCTCTTCATAAGCGTTG
AACCACGAACAGGGCATTTGGTTGTTTTGTCTTGTGTAGAAGATAGCCCA
GCAGCTCGAGCCGGGATACATGAAGGGGATGAGTTGATTGAGATTAATGG
GGAGAGGCTTGATGGTATTGATAGTGAAGCAGCAGCTCTGAAGCTCAGAG
GGCGTGCGGGAACACCAGTTACAGTAAAAGTTCACAGTGGAAAAGATGTG
GGAAGGGAGTCTGGTACCAGAGAGGTCAACATACCTCGTGGGTACATTAA
GCTTTCCCCTATATCTCGTACCATCATCCCTCACAGAACTCCTGATGGAC
ATCTTACAAAGACTGGTTATGTGAAGCTGTCAGCTTTCTCTCAGACTGCA
GCTGCTGATATGGCAAATACAATTCATGAACTGGAAAGTGAAGGAGCACA
CTCATACATACTCGATTTGCGGAACAATCCAGGGGTCTGGTTAAAGCAGG
ACTTGATGTTGCCCAAATATGGCTAGATGGAGACGAGACTCTTGTGAACG
CAGTTGACAGGGAAGGACATACGTTACCTATTAACATGGGTCGATGGGCA
TGCCATAACTCATGATCCCCTGGTG
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