CF417755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_ARATH (Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=2 SV=2) HSP 1 Score: 352.443 bits (903), Expect = 1.249e-96 Identity = 172/225 (76.44%), Postives = 197/225 (87.56%), Query Frame = 3 Query: 9 FKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKLNLFLK 683 FKGTVE+IT RT+SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG+ SKRK YLP+DKQFLITRNVPCLRRAASV E+YE AGGE+LVD+EDNDGWLATHGKPK K E+DNLPSM+A++I++ N +++I TYFGG DIPDM E++E D+++EN DPATL STYLVAHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLL+ L ++ Sbjct: 11 FKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDK--GKEEDNLPSMDALDINEKNTIQSIPTYFGG--EEDDDIPDMEEFDEADNVVEN--DPATLQSTYLVAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVME 229
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_DICDI (Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3 PE=3 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 7.190e-44 Identity = 109/244 (44.67%), Postives = 139/244 (56.97%), Query Frame = 3 Query: 18 TVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGA-GGEILVDNEDNDGWLATHGKPKAKCDEDE---------DDNLPSMEAVEISK---NNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATL-----PSTYLVAHE----------PDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLK 665 TVEK+T + S F E+GVL+ EFV AGD L KC TW+WESG+PS+ SYLP +KQFL+TRNVPC R ++E E + + EI ++++ D W+A EDE DD P+ +K NNN + DIPD+ ++ + D+IIE E DPA L +T A+ D+DNILRTRTYDISITYDKYYQTPRVWL GYDE+R LK Sbjct: 16 TVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRNVSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAPQPVGNQDDIEDEKVDISSLKIDDKKPNTTTTTTAKPTNNNN----NNNDDEDEDEDGDIPDLDDFQD-DNIIEEE-DPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDISITYDKYYQTPRVWLFGYDENRKPLK 253
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_DANRE (Autophagy-related protein 3 OS=Danio rerio GN=atg3 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.477e-36 Identity = 92/230 (40.00%), Postives = 120/230 (52.17%), Query Frame = 3 Query: 3 GIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLKLN 671 G G E +T S FKE GV++ EFV AGD+LV CPTW W SGE +K K YLP DKQFL+TRNVPC +R +E E E +++ +D D GW+ T + + ++ N A + DM EY E + ETD ATL ++ + A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L ++ Sbjct: 10 GTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPNDKQFLLTRNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTFHNSGVTGVTEAVREISLDNKDNMNMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLL---ETDDATLDTSKMADLSKTKAEAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVD 233
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_MOUSE (Autophagy-related protein 3 OS=Mus musculus GN=Atg3 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.041e-34 Identity = 90/220 (40.91%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLATHGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLL 662 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T+ + + ++E+ + K + A+ + DM EY E + ETD ATL + +V A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITEAVKEI-TLESKDSIKLQDCSALCD--EEDEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKADAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPL 227
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_BOVIN (Autophagy-related protein 3 OS=Bos taurus GN=ATG3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.151e-33 Identity = 91/221 (41.18%), Postives = 122/221 (55.20%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLL 662 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP+ KQFL+T+NVPC +R +E E E +++ +D D GW+ T H A E + ++E+ + K + A+ + DM EY E + ETD ATL + +V +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPSGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGIAGITEAVKE--ITLESKDSIKLQDCSALCE--EEEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPL 227
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_RAT (Autophagy-related protein 3 OS=Rattus norvegicus GN=Atg3 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33 Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLATHGKP--KAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLL 662 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R +E E E +++ +D D GW+ T+ + ++ L S +++++ + + + DM EY E + ETD ATL + +V A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDSIKLQDCSVLCDEE-----EEEEEGEAADMEEYEESGLL---ETDEATLDTRRIVEACKAKADAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPL 227
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_HUMAN (Autophagy-related protein 3 OS=Homo sapiens GN=ATG3 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.503e-33 Identity = 89/224 (39.73%), Postives = 120/224 (53.57%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVR---AISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLL 662 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R +E E E +++ +D D GW+ T H E +++ + + +N+R + + DM EY E + ETD ATL + +V +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R L Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITE-------AVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPL 227
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_XENTR (Autophagy-related protein 3 OS=Xenopus tropicalis GN=atg3 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33 Identity = 86/218 (39.45%), Postives = 121/218 (55.50%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYL------VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESR 653 E +T S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T H + ++ L + + + + N V + DM +Y E +++N D AT+ ++ + A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R Sbjct: 17 EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDE---QEAIIEEDDGDGGWVDTFHHSLTGVTEAVKEITLETQDCGKTTSNIAVD------DDDDDDEGEAADMEDYEE-SGLLDN--DDATVDTSKIKEACKPKADLGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQR 222
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_XENLA (Autophagy-related protein 3 OS=Xenopus laevis GN=atg3 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33 Identity = 87/219 (39.73%), Postives = 121/219 (55.25%), Query Frame = 3 Query: 24 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT--HGKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGGXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYL------VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESR 653 E +T S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T H + ++ L + + + + N V + DM +Y E ++EN D AT+ ++ + A +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R Sbjct: 17 EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDE---QEAIIEEDDGDGGWVDTFHHTGLSGVTEAVKEITLETQDCGKTTDNIAV------CDDDDDDEGEAADMEDYEE-SGLLEN--DDATVDTSKIKEACKPKADLGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQR 223
BLAST of CF417755 vs. ExPASy Swiss-Prot
Match: ATG3_CRYNE (Autophagy-related protein 3 OS=Cryptococcus neoformans GN=ATG3 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31 Identity = 81/217 (37.33%), Postives = 112/217 (51.61%), Query Frame = 3 Query: 51 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNED--------NDGWLATH---GKPKAKCDEDEDDNLPSMEAVEISKNNNVRAISTYFGG-----XXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESR 653 S FKE G ++ EFV AGD L K P W WE GE S+ + +LP DKQ+L+TRNVPCLRRA +V+ E L+ D +D W+ATH P D DE ++P ++ + + ++ GG DIPDM E D +E++ + + + N+L+ RTYD I+YDK+YQTPR WL GYDE + Sbjct: 26 SKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGESSRARDFLPPDKQYLVTRNVPCLRRATAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVATHINRSPPHRPTDMDEIPDIP--DSPTTAPTREMAGLNVSSGGKLEEDEIPDIDDIPDMDEEGLED--LEDDAAVRIVHPSEAEVNSTAGKNLLQVRTYDCIISYDKHYQTPRFWLFGYDEHK 238 The following BLAST results are available for this feature:
BLAST of CF417755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417755 ID=CF417755; Name=CF417755; organism=Citrus sinensis; type=EST; length=685bpback to top |