CF417756

Overview
NameCF417756
Unique NameCF417756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417756 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 7.743e-24
Identity = 49/66 (74.24%), Postives = 61/66 (92.42%), Query Frame = 3 
Query:    3 EVSQPSDAASVLAVVDPRLSGYPLTGVIHLFKVAMMCVEDESSARPTMREVVHMLANPPQSAPSLI 200
            E++QPSDAA V+A+VDPRL+GYPLT VIH+FK+AMMCVE+E++ARPTMREVVHML NPP+S  +LI
Sbjct:  913 EITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSVANLI 978
The following BLAST results are available for this feature:
BLAST of CF417756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLV1_ARATH7.743e-2474.24Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-686 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-008_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417756 ID=CF417756; Name=CF417756; organism=Citrus sinensis; type=EST; length=387bp
CTGAAGTCTCCCAGCCGTCTGATGCAGCTTCAGTTCTGGCAGTTGTGGAC
CCCAGGCTTAGTGGGTACCCACTCACAGGGGTTATTCACTTGTTCAAAGT
TGCTATGATGTGCGTTGAGGATGAAAGCTCAGCTAGACCTACCATGAGGG
AAGTTGTTCACATGCTCGCTAACCCTCCACAGTCTGCCCCAAGCCTCATC
ACTCTTTAACAATGTTTTGGAGTACATATAACCAAAACAAATTGTAATAA
TTTTGTGACAAGAATCTGTGGGTGTTTGCTGCTTAAATTTTCTTTACCTA
CCGTAAAATGCTGACTTTATGTCTGTCTGTGTATTTTGTTATTTTTGTTC
GTAAAAGGTAATCTGTGTCTGTGAAACTGTGAAAACT
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