CF417774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.857e-37 Identity = 85/114 (74.56%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 51 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.857e-37 Identity = 85/114 (74.56%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.857e-37 Identity = 85/114 (74.56%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.857e-37 Identity = 85/114 (74.56%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.704e-36 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRA+ Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.704e-36 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRA+ Sbjct: 53 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.704e-36 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRA+ Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.704e-36 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRA+ Sbjct: 51 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.226e-36 Identity = 84/114 (73.68%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165
BLAST of CF417774 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.226e-36 Identity = 84/114 (73.68%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 3 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 344 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY MAIGIVGDAGVRANAQQPKLFVGM YGLIVGIILSSRAGQSRAD Sbjct: 52 VMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165 The following BLAST results are available for this feature:
BLAST of CF417774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417774 ID=CF417774; Name=CF417774; organism=Citrus sinensis; type=EST; length=646bpback to top |