CF417776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: C3H48_ARATH (Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis thaliana GN=ZFWD1 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.553e-58 Identity = 103/136 (75.74%), Postives = 121/136 (88.97%), Query Frame = 2 Query: 2 NTDLSLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 409 N DLSL+GPVGQVY++ G DLLF GTQDG+IL W++N TT+CF+PAASL GH+LAVVSL VGAN+LYSG+MDNSI+VW+L+ LQC QTLTEHTSVVMSL+CWDQFLLSCSLD T+K+W AT+ GNLEVTYTH EE Sbjct: 214 NADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEE 349 HSP 2 Score: 98.9821 bits (245), Expect = 2.192e-20 Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 357 GLLQIVETWK*LILTMKKHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIXAIQLGPGRSVFHW-------*WDWSSESVAMV 629 G L++ T K +++GVLALCG+ D+E KPVLLCSCNDNS+ YDLPSF ERGKI AKQEI +IQ+GPG F W WS+ES ++ Sbjct: 338 GNLEVTYTHK------EEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVWKWSTESTPIL 429
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: C3H63_ARATH (Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis thaliana GN=ZFWD2 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.898e-56 Identity = 99/136 (72.79%), Postives = 118/136 (86.76%), Query Frame = 2 Query: 2 NTDLSLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 409 N D SLSGPVGQVY++ G DLLF GTQDG+ILAW++N TNCFEP+ASL GH+LAVV+L VGAN+LYSGSMD +I+VW+L+ LQC QTLT+H+SVVMSL+CWDQFLLSCSLD T+K+W A + GNLEVTYTH EE Sbjct: 221 NADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEE 356 HSP 2 Score: 95.1301 bits (235), Expect = 3.165e-19 Identity = 53/102 (51.96%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 357 GLLQIVETWK*LILTMKKHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS------FAERGKIFAKQEIXAIQLGPGRSVFHW-------*WDWSSESVA 623 G L++ T K ++HGVLALCG+ D+E KPVLLC+CNDN++R YDLPS F ERGKIFAKQEI AIQ+GPG F W W +E A Sbjct: 345 GNLEVTYTHK------EEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIRFTERGKIFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKWCTEPTA 440
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: C3H17_ORYSJ (Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=Os02g0677700 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.566e-53 Identity = 98/134 (73.13%), Postives = 115/134 (85.82%), Query Frame = 2 Query: 8 DLSLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 409 +++L+GP GQVYA+ GN+LLF TQDG ILAW+F+ TN FEPAASL GH LAVVSLVVGA +LYS SMD +IRVW+L TLQC QTL++HT VVMS+LCWDQFLLSCSLD+TIKVW AT+SG+LEVTYTH EE Sbjct: 222 EMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASLVGHQLAVVSLVVGAMRLYSASMDKTIRVWDLATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQTIKVWAATESGSLEVTYTHKEE 355 HSP 2 Score: 92.0485 bits (227), Expect = 2.680e-18 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 3 Query: 357 GLLQIVETWK*LILTMKKHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSFAERGKIFAKQEIXAIQLGPGRSVF 587 G L++ T K ++HG LAL GMPD++ KPVLLCS NDN+VR YDLPSF++RG+IF+KQEI AIQ+GP F Sbjct: 344 GSLEVTYTHK------EEHGALALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFSDRGRIFSKQEIRAIQVGPSGLFF 414
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: C3H62_ARATH (Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis thaliana GN=ZFWD4 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.515e-29 Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 2 Query: 11 LSLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNC--FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 409 L +G VGQV AM N +LF GT G+IL WK + F+ SL+GHS V VG LYSGS+D +I++W+L TLQC TL +HT V SLLCWD+ L+S SLD TIKVW +++G L+V T +E Sbjct: 206 LQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQE 340
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: C3H59_ARATH (Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana GN=ZFWD3 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28 Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 8 DLSLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVT-TNCFEPAASLKGH-SLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 409 D+ L G VGQV+AM N +LF GT G+IL WK + ++ F+ SL+GH S V VVG LYSGS+D +I+VW+L TLQC TL +H V SLLCWD+ L+S SLD TIK+W +++ +L+V T +E Sbjct: 259 DVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQE 394
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: MHCKB_DICDI (Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 14 SLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 +L G G V ++ + LF G+ D +I W F +L+GH V ++++ L+SGS D +I+VW+L+TL+C TL H V +L Q+L S S DKTIKVW Sbjct: 497 TLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIF----TLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVW 607 HSP 2 Score: 75.8702 bits (185), Expect = 1.987e-13 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 59 NDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYT 397 ++LLF G D +I + + + E +LKGH V S+ L+SGS D+SI+VW+L+ L+C TL H V ++L D++L S S DKTIKVW D LE YT Sbjct: 470 DNLLFTGCSDNSIRVYDYK--SQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVW---DLKTLECKYT 577 HSP 3 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 2 Query: 68 LFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 LF G+ D I W F +LKGH+ V ++ + LYSGS D +IRVWNL++L+C TL H V ++ D+ L + S D TIK+W Sbjct: 595 LFSGSNDKTIKVWDLKT----FRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIW 687 HSP 4 Score: 71.2478 bits (173), Expect = 4.895e-12 Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 68 LFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWD--QFLLSCSLDKTIKVW 358 L+ G+ D I W E +A+L+GH V +V+ L++ S DN+I++W+LETL+C TL H + V L W+ + ++SCS D++I+VW Sbjct: 635 LYSGSYDKTIRVWNLK----SLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729 HSP 5 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 14 SLSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 +L G V+ + + LF G+ D I W E +L+ H+ AV +L + L+SGS D +I+VW+L+T +C TL HT V ++ L S S DKTI+VW Sbjct: 537 TLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKT----LECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVW 647
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12 Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 2 Query: 17 LSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 LSG V + ++L G+ D I W N+ T F+ A L+GHS V L KL SGSMD +IR+WN T +C L HT V+ L L+S S D T+K+W Sbjct: 269 LSGHSDGVMCLQLVRNILASGSYDATIRLW--NLAT--FQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLW 378 HSP 2 Score: 67.781 bits (164), Expect = 5.412e-11 Identity = 43/135 (31.85%), Postives = 62/135 (45.93%), Query Frame = 2 Query: 17 LSGPVGQVYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAV--VSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEETW 415 L G V + + LL G+ D + W F+ +L+GH+ V V ++ + SGS D++I++W+LET C T + H V SL D L SCSLD TIK W + + H E W Sbjct: 349 LHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI-----TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVW 478
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: TRAF7_MOUSE (E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 38 VYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 VY+MG DLLF G+ D I W T C + +L+GH V++L + KLYSGS D +I VW+++ LQ T+ H + V +L+ L S SL K IKVW Sbjct: 328 VYSMG---DLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSL-KAIKVW 427
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: TRAF7_HUMAN (E3 ubiquitin-protein ligase TRAF7 OS=Homo sapiens GN=TRAF7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 38 VYAMGXGNDLLFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 358 VY+MG DLLF G+ D I W T C + +L+GH V++L + KLYSGS D +I VW+++ LQ T+ H + V +L+ L S SL K IKVW Sbjct: 404 VYSMG---DLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSL-KAIKVW 503
BLAST of CF417776 vs. ExPASy Swiss-Prot
Match: MHCKA_DICDI (Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 68 LFPGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCXQTLTE-HTSVVMSLLCWDQFLLSCSLDKTIKVW 358 LF ++D I W + +C + +LKGH +V S VV LYSGS DNSI+VW+L+TL+C T+ + H+ V L+ ++ ++S + D +IKVW Sbjct: 1048 LFSTSKDNVIKIWDLS-NFSCID---TLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVW 1141 The following BLAST results are available for this feature:
BLAST of CF417776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417776 ID=CF417776; Name=CF417776; organism=Citrus sinensis; type=EST; length=638bpback to top |