CF417778

Overview
NameCF417778
Unique NameCF417778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 9.969e-100
Identity = 171/228 (75.00%), Postives = 200/228 (87.72%), Query Frame = 1
Query:   25 SSDCVRIKASSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            ++DC     +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK
Sbjct:   57 ATDC-----AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGK 279          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.302e-99
Identity = 169/219 (77.17%), Postives = 196/219 (89.50%), Query Frame = 1
Query:   52 SSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK
Sbjct:   61 AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGK 279          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.792e-94
Identity = 165/229 (72.05%), Postives = 191/229 (83.41%), Query Frame = 1
Query:   22 KSSDCVRIKASSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            KSSD  R   S +     K + K V+++D EE+L + LAK+TADLS KF KE+G+FTVV+SGGSLI SLRKLVE PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLS+VPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK
Sbjct:   59 KSSDTRRKVKSMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGK 287          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.113e-85
Identity = 147/207 (71.01%), Postives = 174/207 (84.06%), Query Frame = 1
Query:   88 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGK 282          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 3.113e-85
Identity = 147/207 (71.01%), Postives = 174/207 (84.06%), Query Frame = 1
Query:   88 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGK 282          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.734e-72
Identity = 131/204 (64.22%), Postives = 155/204 (75.98%), Query Frame = 1
Query:   97 QVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 696
            +VF +  ++AV LAKYTADLS+KF KE+G FTVVLSGG LI  L KL+E PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLS+VP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC
Sbjct:    7 RVFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVC 210          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.794e-72
Identity = 130/203 (64.04%), Postives = 158/203 (77.83%), Query Frame = 1
Query:  100 VFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 696
            VF ++ +L+ ++A+YTA+LSAKF KEKG FTVVLSGG LID L KLV+PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLS+VPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C
Sbjct:    8 VFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAIC 210          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.834e-69
Identity = 128/211 (60.66%), Postives = 161/211 (76.30%), Query Frame = 1
Query:   76 KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVC 696
            K K+K + VF ++++L+ ++A YTA+LSAKF KE+G FTVVLSGG LI  L +L+EP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLS+VPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC
Sbjct:    7 KTKSKKI-VFPTKKELSEAMATYTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVC 216          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.556e-60
Identity = 109/205 (53.17%), Postives = 148/205 (72.20%), Query Frame = 1
Query:   94 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            ++V ++ E+L++ L  Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LS+V +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P+FDL+LLGMG DGH+ASLFP HP L+  + WVTF+ DS KPPPERITFT PVINS+A + +V  G  K
Sbjct:   13 IRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESK 217          
BLAST of CF417778 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.720e-59
Identity = 103/209 (49.28%), Postives = 147/209 (70.33%), Query Frame = 1
Query:   82 KNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 708
            +N  +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  K
Sbjct:   13 RNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDK 221          
The following BLAST results are available for this feature:
BLAST of CF417778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL4_ORYSI9.969e-10075.00Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSJ1.302e-9977.17Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH4.792e-9472.05Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ3.113e-8571.01Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI3.113e-8571.01Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH6.734e-7264.22Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH8.794e-7264.04Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.834e-6960.66Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL1_ARATH1.556e-6053.17Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ1.720e-5949.28Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-708 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417778 ID=CF417778; Name=CF417778; organism=Citrus sinensis; type=EST; length=709bp
AACATTTCCCTTGATCGGAACAAATCATCGGACTGCGTGAGAATCAAGGC
ATCATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAG
TTTTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCC
GATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTT
ATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGT
ATGTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAA
AGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGA
TGGTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCA
ATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTC
AAGCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTT
TCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAG
CTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTT
ACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCAC
CTTCCCTGTAATCAACTCATCTGCATATATTGCCATGGTGGTGTGTGGTG
CTGGAAAAT
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