CF417785

Overview
NameCF417785
Unique NameCF417785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417785 vs. ExPASy Swiss-Prot
Match: SF21_HELAN (Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.364e-51
Identity = 102/187 (54.55%), Postives = 132/187 (70.59%), Query Frame = 2 
Query:    2 SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLXCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGIWIVQ----TNSKC*PKKSIESVLHLPRASFTRKHGLEVKTNK 550
            SWTE  YNK+ S  LYYYGMC +VKELL+ RYFSKEV GN ++PESD+V ACR+LLDER S NVW +L+AI+ R DI+E L+ L C+++IFVG+SSPFH EA+ +  K+    SALVEV ACGSMVT+EQPHAMLIP+E FL G  + +    +NS   P+  +      P   +  K GL+++  K
Sbjct:  157 SWTERFYNKLTSKTLYYYGMCDLVKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELKSLECKTIIFVGDSSPFHDEALQIAEKLGTNCSALVEVHACGSMVTQEQPHAMLIPLENFLKGFGLYRPCRYSNS---PRSPLGPSSIDPELLYPEKMGLKLRPIK 340
The following BLAST results are available for this feature:
BLAST of CF417785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SF21_HELAN4.364e-5154.55Pollen-specific protein SF21 OS=Helianthus annuus ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-715 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417785 ID=CF417785; Name=CF417785; organism=Citrus sinensis; type=EST; length=663bp
CTCTTGGACAGAATGGTTGTATAATAAGGTAATGTCAAATTTACTCTACT
ACTATGGCATGTGTGGGGTGGTGAAGGAATTATTGCTAAAGCGGTACTTC
AGCAAGGAAGTTCGTGGTAATGCCCAAGTACCAGAATCTGATATAGTTCA
GGCATGCAGAAGACTGCTGGATGAAAGACAGAGCTCAAATGTTTGGCATT
TTCTTGAAGCAATTAATGGGAGACCCGACATCAGCGAAGGGCTGCGGAAA
CTGCNNTGTCGCTCTCTAATATTTGTTGGTGAAAGCTCTCCTTTCCATTC
TGAGGCTGTCCACATGACTTCTAAAATTGATAGAAGATATAGTGCTTTGG
TTGAGGTTCAGGCATGTGGATCGATGGTGACAGAGGAGCAGCCCCATGCC
ATGTTGATACCAATGGAGTACTTTCTCATGGGGATATGGATTGTACAGAC
CAACTCTAAGTGTTAGCCCAAGAAGTCCATTGAGTCCGTGTTGCATCTCC
CCAGAGCTTCTTTCACCCGAAAGCATGGGCTTGAAGTTAAAACCAATAAA
AACTCGAATTTCCGCGGGAATCATCTAATANAAGATGGAAGAGGNAAGGC
GTGGTTCTTTTTTGCNATAATATGGTTAAGGTGCATGTAAAGTTTTCTGA
TTGGTCGAGACGA
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