CF417795

Overview
NameCF417795
Unique NameCF417795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1625 contig Csv1_Contig1625:645..1245. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF417795 vs. ExPASy Swiss-Prot
Match: Y2766_ARATH (Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 4.577e-86
Identity = 152/171 (88.89%), Postives = 163/171 (95.32%), Query Frame = 1 
Query:    1 MKPDFDPAKGGRPEFYFEEGAYPEQGDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLXDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTHF 513
            MKP FDP+KGGRPEF+F++GAYPEQ DWIGQKNQIDAAKAAG KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGL DK+GGIRELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFKALF+Q+TT F
Sbjct:  155 MKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFKALFTQVTTKF 325
[Close]
BLAST of CF417795 vs. ExPASy Swiss-Prot
Match: Y5224_ARATH (Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 2.874e-80
Identity = 144/171 (84.21%), Postives = 153/171 (89.47%), Query Frame = 1 
Query:    1 MKPDFDPAKGGRPEFYFEEGAYPEQGDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLXDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTHF 513
            MKP FDP KGGRPEF FE+G YPEQ DWIGQKNQIDAAK AG K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+RELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKALFSQ+T+ F
Sbjct:   83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253
The following BLAST results are available for this feature:
BLAST of CF417795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y2766_ARATH4.577e-8688.89Uncharacterized protein At2g37660, chloroplastic O... [more]
Y5224_ARATH2.874e-8084.21Uncharacterized protein At5g02240 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-725 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417795 ID=CF417795; Name=CF417795; organism=Citrus sinensis; type=EST; length=601bp
ATGAAACCTGATTTTGATCCTGCCAAAGGTGGAAGGCCTGAGTTCTACTT
TGAAGAGGGTGCATATCCTGAACAGGGNGATTGGATTGGTCAGAAAAATC
AAATTGATGCTGCTAAGGCTGCTGGAGCGAAGCAAATTGTGTTGGTTGGA
TCGATGGGAGGAACAAATCTTAATCATCCCTTGAACAGTTTGGGCAATGG
CAATATATTGGTTTGGAAAAGAAAGGCTGAGCAGTATTTGGCTGACTCTG
GTATTCCATACACAATTATAAGGGCCGGAGGCCTNNGGGATAAAGAAGGT
GGTATCCGAGAATTACTTGTCGGTAAGGATGATGAACTTCTTCAGACAGA
AACAAGGACAATTGCCAGGGCCGATGTTGCCGAAGTCTGCATTCAGGCAC
TACAGTTTGAGGAGGCCAAATTTAAGGCATTTGATCTGGCCTCAAAGCCT
GAGGGAACTGGCACACCCACAAAGGATTTTAAAGCTCTCTTTTCTCAAAT
TACTACTCATTTCTGAGTCTCAGTCGCCATTCTCCTCCTGAGTTTTTATG
TTAGAAAACTGTAATGCCTTGTATTAAAAAGGGGAATGAATAAATGAATG
C
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