CF417807

Overview
NameCF417807
Unique NameCF417807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417807 vs. ExPASy Swiss-Prot
Match: GDL71_ARATH (GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.726e-41
Identity = 75/122 (61.48%), Postives = 96/122 (78.69%), Query Frame = 1
Query:    4 SFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSS----KTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKL 357
            SFQ+CNET+N+L   HN LLQQ VAKLNNETK S F+ILDL+ AF+T FKNKGS+    + E+PL PCCVG+ ++ +CGSVD+ GVK Y VC  P+ +FFWDG+HP++EGW+SVYS L+  L
Sbjct:  231 SFQRCNETQNALVNLHNNLLQQVVAKLNNETKQSTFIILDLYNAFLTVFKNKGSNPGSTRFESPLKPCCVGVSREYNCGSVDEKGVKKYIVCDNPKTAFFWDGLHPTEEGWRSVYSVLRESL 352          
BLAST of CF417807 vs. ExPASy Swiss-Prot
Match: GDL50_ARATH (GDSL esterase/lipase At3g09930 OS=Arabidopsis thaliana GN=At3g09930 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.849e-35
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 1
Query:    4 SFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGS----SKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIY 369
            SFQ+CN T+N+ +  HN LL +A+A+LNNETK S FV+LD + AF+T FKNKG     S+  NPL PCCVG+     C +VD+ G K Y +C  P+A+FFWD  HPS+EGW+SVYS L   L+ I+
Sbjct:  228 SFQRCNATDNASTNLHNYLLHKAIARLNNETKPSTFVVLDHYNAFLTVFKNKGPEPGVSRFGNPLKPCCVGVNSSYDCSNVDEKGEKKYIICEDPKAAFFWDIFHPSEEGWRSVYSVLHKHLKAIW 353          
BLAST of CF417807 vs. ExPASy Swiss-Prot
Match: GDL70_ARATH (GDSL esterase/lipase At5g03600 OS=Arabidopsis thaliana GN=At5g03600 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27
Identity = 58/118 (49.15%), Postives = 79/118 (66.95%), Query Frame = 1
Query:    4 SFQQCNETENSLSGFHNLLLQQAVAKLNNET----KDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSAL 345
            SF+ CNE++++L   HN LL++ VAKLN ++    K+  F I+D+  AFMT  KNKGS + +NP+  CC G      CG   D G KLYT+C  P++ FFWD VHP+QEGW+S+YS L
Sbjct:  200 SFKSCNESQSALVELHNKLLKKVVAKLNEQSRVMKKEQHFFIIDIHNAFMTVMKNKGSKRFKNPMKSCCEGY-----CGRSSDGG-KLYTLCDDPKSFFFWDAVHPTQEGWRSIYSVL 311          
BLAST of CF417807 vs. ExPASy Swiss-Prot
Match: GDL69_ARATH (GDSL esterase/lipase At5g03590 OS=Arabidopsis thaliana GN=At5g03590 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.017e-25
Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 1
Query:    4 SFQQCNETENSLSGFHNLLLQQAVAKLNNE----TKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQ 363
            SF+ CNE+ + L   HN  L++AVAKLN E    TK   FVI+DL  AFMT  + KG+ + ++PL PCC G      C  +D  G K YT+C  P+++FFWD ++P+QEGW+S+YS L   L +
Sbjct:  222 SFRSCNESYSDLVRLHNESLKKAVAKLNKEDKFRTKGDRFVIVDLHKAFMTILEKKGNKRFKSPLKPCCEG-----DCARMDMKGAKKYTLCNDPKSAFFWDEINPTQEGWRSIYSLLGKSLTE 340          
BLAST of CF417807 vs. ExPASy Swiss-Prot
Match: GDL45_ARATH (GDSL esterase/lipase At2g36325 OS=Arabidopsis thaliana GN=At2g36325 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.138e-19
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1
Query:   22 ETENSLSGFHNLLLQQAVAKLNNE---TKDSAFVILDLFGAFMTTFKNKGSSKTE---NPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQ 360
            +T ++ +  HN LL++ + KLN++     D +F+ LDL+ AF+T FKNKG S      +P   CC    + + CG    +G KLYT+C  P++ FFWD VH S +GW+SV+S L P  Q
Sbjct:  238 DTNDTSTYLHNSLLRKGLIKLNDKEINNNDKSFMTLDLYNAFVTIFKNKGVSGVSTFPDPFKACCA-TKRGTFCGDRSLSGKKLYTLCDDPKSFFFWDNVHISDQGWRSVFSLLLPDSQ 355          
The following BLAST results are available for this feature:
BLAST of CF417807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GDL71_ARATH1.726e-4161.48GDSL esterase/lipase At5g03610 OS=Arabidopsis thal... [more]
GDL50_ARATH1.849e-3553.17GDSL esterase/lipase At3g09930 OS=Arabidopsis thal... [more]
GDL70_ARATH3.161e-2749.15GDSL esterase/lipase At5g03600 OS=Arabidopsis thal... [more]
GDL69_ARATH1.017e-2545.97GDSL esterase/lipase At5g03590 OS=Arabidopsis thal... [more]
GDL45_ARATH4.138e-1941.18GDSL esterase/lipase At2g36325 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-737 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417807 ID=CF417807; Name=CF417807; organism=Citrus sinensis; type=EST; length=559bp
CTGTCCTTCCAACAGTGCAACGAAACAGAGAATTCCCTCTCCGGCTTCCA
CAACCTTCTGTTGCAACAAGCTGTTGCAAAGCTGAACAATGAAACCAAAG
ATTCTGCTTTTGTCATTCTTGATCTTTTTGGCGCCTTCATGACTACTTTC
AAGAACAAAGGAAGCTCGAAGACTGAGAATCCGCTGATGCCATGCTGTGT
TGGGATAGGGAAAGATTCCAGTTGTGGAAGTGTAGATGACAATGGAGTTA
AGTTGTATACAGTCTGTGCGAAGCCTGAAGCATCATTCTTTTGGGACGGT
GTTCATCCTTCACAGGAGGGATGGCAATCCGTGTATTCTGCTTTGAAACC
CAAGCTTCAACAGATTTATTGTTAATTAGAATTTCAAGTGTCCAAATTTG
TAATTCAGTTGTTAGCTAGCCATCGTGTTTTGTATGTTTTTATGTCAAGC
CTCCGTCTTATTCAATTGTTCACAAACAGCGTTTGCTGGTCTGCTCGTTT
TATGTGTGCGAGGAAATAACACAGATGGTGTCTTTTGCACGTAGCTGCAG
CTTCACTAT
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